Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_300_3
# 1429
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_300_4
# 1430
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_50_1
# 1431
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_50_2
# 1432
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_50_3
# 1433
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_50_4
# 1434
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_100_1
# 1435
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_100_2
# 1436
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior1_100_3
# 1437
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior1_100_4
# 1438
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior1_200_1
# 1439
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior1_200_2
# 1440
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior1_200_3
# 1441
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior1_200_4
# 1442
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior1_300_1
# 1443
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior1_300_2
# 1444
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior1_300_3
# 1445
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior1_300_4
# 1446
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_50_1
# 1447
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_50_2
# 1448
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_50_3
# 1449
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior2_50_4
# 1450
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior2_100_1
# 1451
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_100_2
# 1452
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior2_100_3
# 1453
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_100_4
# 1454
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_200_1
# 1455
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_200_2
# 1456
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior2_200_3
# 1457
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_200_4
# 1458
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_posterior2_300_1
# 1459
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior2_300_2
# 1460
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior2_300_3
# 1461
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior2_300_4
# 1462
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_50_1
# 1463
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_50_2
# 1464
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_50_3
# 1465
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_50_4
# 1466
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_100_1
# 1467
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_100_2
# 1468
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_100_3
# 1469
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_100_4
# 1470
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_200_1
# 1471
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_200_2
# 1472
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_200_3
# 1473
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_200_4
# 1474
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_300_1
# 1475
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_300_2
# 1476
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_posterior3_300_3
# 1477
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_posterior3_300_4
# 1478
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data