Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_7
# 2729
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_8
# 2730
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_9
# 2731
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_10
# 2732
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_11
# 2733
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_1
# 2734
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_2
# 2735
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_3
# 2736
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_4
# 2737
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_5
# 2738
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_6
# 2739
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_7
# 2740
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_8
# 2741
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_9
# 2742
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_10
# 2743
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse2_11
# 2744
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_1
# 2745
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_2
# 2746
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_3
# 2747
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_4
# 2748
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_5
# 2749
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_6
# 2750
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_7
# 2751
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_8
# 2752
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_9
# 2753
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_10
# 2754
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_11
# 2755
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_12
# 2756
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_13
# 2757
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_14
# 2758
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_15
# 2759
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_16
# 2760
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_17
# 2761
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_18
# 2762
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_19
# 2763
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_20
# 2764
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_21
# 2765
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse3_22
# 2766
Dataset Kind Image data
Dataset Size 35.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_1
# 2767
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_2
# 2768
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_3
# 2769
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_4
# 2770
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_5
# 2771
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_6
# 2772
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_7
# 2773
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_8
# 2774
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_9
# 2775
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_10
# 2776
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_11
# 2777
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse4_12
# 2778
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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