Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua-mixture_Mouse2_44
# 2579
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_1
# 2580
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_2
# 2581
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_3
# 2582
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_4
# 2583
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_5
# 2584
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_6
# 2585
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_7
# 2586
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_8
# 2587
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_9
# 2588
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_10
# 2589
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_11
# 2590
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_12
# 2591
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_13
# 2592
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_14
# 2593
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_15
# 2594
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_16
# 2595
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_17
# 2596
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_18
# 2597
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_19
# 2598
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_20
# 2599
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_21
# 2600
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_22
# 2601
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_23
# 2602
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_24
# 2603
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_25
# 2604
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_26
# 2605
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_27
# 2606
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_28
# 2607
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_29
# 2608
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_30
# 2609
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_31
# 2610
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_32
# 2611
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_33
# 2612
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_34
# 2613
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_35
# 2614
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_36
# 2615
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_37
# 2616
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_38
# 2617
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_39
# 2618
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_40
# 2619
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_41
# 2620
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_42
# 2621
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_43
# 2622
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse1_44
# 2623
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse2_1
# 2624
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse2_2
# 2625
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse2_3
# 2626
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse2_4
# 2627
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bua-Hex_Mouse2_5
# 2628
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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