Summary of 12-Takayama-Oocyte
SSBD:OMERO.gallery Project
SSBD:OMERO Project
SSBD:downloads
Kind
Image data, Quantitative data
based on Experiment
Number of Datasets
238
( Image datasets: 119,
Quantitative data datasets: 119 )
Size of Datasets
8.4 GB
( Image datasets: 4.7 GB,
Quantitative data datasets: 3.7 GB )
Organism(s)
Caenorhabditis elegans
Gene symbol(s)
fog-2, him-5, og-2, spe-11(hc77), spe-11(hc88), spe-42, spe-9(hc52), spe-9(hc88), trp-3, trp-3(sy693), trp-3(tn1233), yokSi3, yokSi5, yokSi6, yokSi7
Datatype
oocyte shape dynamics
Biological Process (BP)
egg activation
Cellular Component (CC)
cytoplasm
Biological Imaging Method
-
XYZ Scale
XY: 0.435 micrometer/pixel, Z: 0 micrometer/slice, XY: 0.417 micrometer/pixel, Z: 0 micrometer/slice
T scale
5 second for each time interval, 1.6 second for each time interval, 1.014 second for each time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Jun Takayama, Shuichi Onami (2016) The Sperm TRP-3 Channel Mediates the Onset of a Ca(2+) Wave in the Fertilized C. elegans Oocyte., Cell reports, Volume 15, Number 3, pp. 625-637
Published in 2016 Apr 19
(Electronic publication in April 7, 2016, midnight )
(Abstract) Sperm induce Ca(2+) waves in the fertilized egg by introducing soluble factors or by surface interactions, which activate egg Ca(2+) channels. Involvement of sperm Ca(2+) channels is predicted by the conduit model; however, this model has not been validated. In Caenorhabditis elegans, the sperm-specific TRP family Ca(2+) channel TRP-3 mediates sperm-oocyte fusion. Here, using high-speed in vivo imaging and image analyses, we show that sperm induce an immediate local Ca(2+) rise followed by a Ca(2+) wave in fertilized C. elegans oocytes. Oocytes fertilized by rare trp-3 escaper sperm showed a lack of local rise and a delay in onset of the Ca(2+) wave. Sperm Ca(2+) imaging suggests that the local rise is not due to the bolus introduction of stored Ca(2+). These results suggest that, along with its primary function in sperm-oocyte fusion, TRP-3 induces Ca(2+) waves in fertilized oocytes, consistent with the conduit model.
(MeSH Terms)
Contact
Shuichi Onami
, RIKEN
, Quantitative Biology Center
, Laboratory for Developmental Dynamics
Contributors
Jun Takayama, Shuichi Onami
Dataset List of 12-Takayama-Oocyte
Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
40.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.3 MB)
Download Image data
zip (17.4 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
20.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.4 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
22.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.2 MB)
Download Image data
zip (68.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
84.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (68.8 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
21.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.0 MB)
Download Image data
zip (64.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
84.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.1 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
24.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.1 MB)
Download Image data
zip (64.5 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
84.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.5 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
21.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1008.1 KB)
Download Image data
zip (64.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
84.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.9 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
22.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.2 MB)
Download Image data
zip (66.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
84.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (66.2 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
23.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.2 MB)
Download Image data
zip (9.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
11.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.9 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
49.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.3 MB)
Download Image data
zip (17.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
21.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.2 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
55.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.4 MB)
Download Image data
zip (23.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
30.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (23.8 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
42.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.9 MB)
Download Image data
zip (19.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
22.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.2 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
54.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.6 MB)
Download Image data
zip (20.5 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
24.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (20.5 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
30.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.4 MB)
Download Image data
zip (10.0 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
12.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (10.0 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
41.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.0 MB)
Download Image data
zip (13.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
16.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (13.8 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
44.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.3 MB)
Download Image data
zip (16.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
19.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.1 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
48.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.6 MB)
Download Image data
zip (16.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
19.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.2 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
41.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.9 MB)
Download Image data
zip (14.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
17.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (14.1 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
55.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.6 MB)
Download Image data
zip (18.4 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
21.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.4 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
36.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.6 MB)
Download Image data
zip (12.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
16.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (12.9 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
25.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.1 MB)
Download Image data
zip (7.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
9.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (7.9 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
40.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.8 MB)
Download Image data
zip (15.5 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
18.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (15.5 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
41.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.9 MB)
Download Image data
zip (18.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
22.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.8 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
39.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.9 MB)
Download Image data
zip (19.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
23.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.1 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
35.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.7 MB)
Download Image data
zip (20.4 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
23.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (20.4 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
41.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (1.9 MB)
Download Image data
zip (18.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
21.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.1 MB)
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
43.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (2.1 MB)
Download Image data
zip (14.7 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
17.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (14.7 MB)