Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_1
# 2679
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_2
# 2680
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_3
# 2681
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_4
# 2682
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_5
# 2683
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_6
# 2684
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_7
# 2685
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_8
# 2686
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_9
# 2687
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_10
# 2688
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_11
# 2689
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_12
# 2690
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_13
# 2691
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_14
# 2692
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_15
# 2693
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_16
# 2694
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_17
# 2695
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_18
# 2696
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_19
# 2697
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_20
# 2698
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_21
# 2699
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_22
# 2700
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_23
# 2701
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_24
# 2702
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_25
# 2703
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_26
# 2704
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_27
# 2705
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_28
# 2706
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_29
# 2707
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_30
# 2708
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_31
# 2709
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_32
# 2710
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_33
# 2711
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_34
# 2712
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_35
# 2713
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_36
# 2714
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_37
# 2715
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_38
# 2716
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_39
# 2717
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_40
# 2718
Dataset Kind Image data
Dataset Size 33.6 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_41
# 2719
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_42
# 2720
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_43
# 2721
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Bz-Val-mixture_Mouse2_44
# 2722
Dataset Kind Image data
Dataset Size 33.6 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_1
# 2723
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_2
# 2724
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_3
# 2725
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_4
# 2726
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_5
# 2727
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Oca-Pna_Mouse1_6
# 2728
Dataset Kind Image data
Dataset Size 33.6 MB
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SSBD:OMERO
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