Summary of 42-Hayashi-NeuronalCellDyn
SSBD:OMERO.gallery Project
SSBD:OMERO Project
SSBD:downloads
Title
BDML file for the tracking of an endosome retrogradely or anterogradely transported in the axon of a supracervical ganglion (SCG) neuron in vitro
Kind
Quantitative data
based on Experiment
Number of Datasets
198
( Image datasets: 0,
Quantitative data datasets: 198 )
Size of Datasets
87.2 MB
( Image datasets: 0 bytes,
Quantitative data datasets: 87.2 MB )
Organism(s)
Rattus norvegicus
Datatype
neuron cell dynamics
Biological Process (BP)
axonal transport
Cellular Component (CC)
endosome
Biological Imaging Method
-
XYZ Scale
X: 1 micrometer, Y: NA, Z: NA
T scale
0.0102 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
FluorescenceMicroscope
Acquisition mode
WideField
Contrast method
Fluorescence
Microscope model
Olympus IX71
Detector model
Andor LucaS
Objective model
Olympus UPlanFL 100x/1.3
Filter set
Olympus WIG filter set
Related paper(s)
Kumiko Hayashi, Yuta Tsuchizawa, Mitsuhiro Iwaki, Yasushi Okada (2018) Application of the fluctuation theorem for noninvasive force measurement in living neuronal axons., Molecular biology of the cell, Volume 29, Number 25, pp. 3017-3025
Published in 2018 Dec 1
(Electronic publication in Oct. 3, 2018, midnight )
(Abstract) Although its importance is recently widely accepted, force measurement has been difficult in living biological systems, mainly due to the lack of the versatile noninvasive force measurement methods. The fluctuation theorem, which represents the thermodynamic properties of small fluctuating nonequilibrium systems, has been applied to the analysis of the thermodynamic properties of motor proteins in vitro. Here we extend it to the axonal transport (displacement) of endosomes. The distribution of the displacement fluctuation had three or four distinct peaks around multiples of a unit value, which the fluctuation theorem can convert into the drag force exerted on the endosomes. The results demonstrated that a single cargo vesicle is conveyed by one to three or four units of force production.
(MeSH Terms)
Contact
Yasushi Okada
, RIKEN
, Quantitative Biology Center
, Laboratory for Cell Polarity Regulation
Contributors
Kumiko Hayashi, Yuta Tsuchizawa, Mitsuhiro Iwaki, Yasushi Okada
Dataset List of 42-Hayashi-NeuronalCellDyn
Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
556.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (23.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
488.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (20.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
590.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (24.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
352.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (16.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
559.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (23.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
604.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (25.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
514.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
464.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
336.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (15.3 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
630.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (26.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
436.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (18.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
462.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
438.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
436.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (18.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
383.5 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (17.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
533.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (22.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
564.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (23.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
305.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (14.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
220.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (10.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
260.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (12.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
431.5 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (18.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
215.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (10.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
246.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (11.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
244.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (11.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
208.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (10.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
298.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (13.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
794.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (32.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
429.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (18.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
276.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (13.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
388.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (17.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
321.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (14.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
284.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (13.3 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
495.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
141.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (7.3 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
312.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (14.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
185.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (9.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
144.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (7.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
378.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (17.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
388.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (17.3 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
367.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (16.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
215.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (10.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
302.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (14.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
276.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (13.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
251.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (12.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
281.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (13.3 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
185.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (9.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
172.5 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (8.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
170.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (8.4 KB)
Download Image data
zip