SSBD:database

Thumbnail for 219-Konishi-CalciumIonDyn

Summary of 219-Konishi-CalciumIonDyn

SSBD:database
219-Konishi-CalciumIonDyn
SSBD:database URL
https://ssbd.riken.jp/database/219-Konishi-CalciumIonDyn/
SSBD:repository
ssbd-repos-000219
SSBD:repository URL
https://ssbd.riken.jp/repository/219/
Title
Live imaging of Ca2+ concentration dynamics in BrafV600E melanoma cells.
Description
-
Release date
2023-02-21
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
170 ( Image datasets: 170, Quantitative data datasets: 0 )
Size of Datasets
81.4 GB ( Image datasets: 81.4 GB, Quantitative data datasets: 0 bytes )
Organism(s)
Canis lupus familiaris, Mus musculus
Cell lines(s)
BrafV600E cell, MDCK cell
Gene symbol(s)
Gnaq, Ptger1, Ptgfr, Ptgs1, Ptgs1. Ptgs2. Gnaq, Ptgs2, Tbxa2r, Tbxas1, Tbxas2r
Protein name(s)
NFAT, PKA
Datatype
-
Molecular Function (MF)
G protein-coupled receptor binding
Biological Process (BP)
Cellular Component (CC)
Biological Imaging Method
bioluminescence imaging, time lapse microscopy
X scale
0.828 micrometer/pixel, 0.637 micrometer/pixel, 0.441 micrometer/pixel, 0.454 micrometer/pixel, 0.414 micrometer/pixel, 0.638924 micrometer/pixel, 0.552 micrometer/pixel, NA
Y scale
0.828 micrometer/pixel, 0.637 micrometer/pixel, 0.441 micrometer/pixel, 0.454 micrometer/pixel, 0.414 micrometer/pixel, 0.638924 micrometer/pixel, 0.552 micrometer/pixel, NA
Z scale
1 micrometer/slice, NA, 5 micrometer/slice
T scale
15 sec per time interval, 3.07 sec per time interval, 6 sec per time interval, 3.08 sec per time interval, 3.02 sec per time interval, 60.22 sec per time interval, 1 min per time interval, 65.43 sec per time interval, 97.39 sec per time interval, 60.09 sec per time interval, 65.3 sec per time interval, 3.05 sec per time interval, 1 sec per time interval, 60.30 sec per time interval, 3.03 sec per time interval, 1.11 sec per time interval, 3.01 sec per time interval, 60.31 sec per time interval, 59.71 sec per time interval, 60.73 sec per time interval, 3 sec per time interval, 6.01 sec per time interval, 5.98 sec per time interval, 3.11 sec per time interval, 60.11 sec per time interval, 60.19 sec per time interval, 3.06 sec per time interval, 60.18 sec per time interval, 6.02 sec per time interval, 61.28 sec per time interval, 60.08 sec per time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Kenta Terai , kyoto University , Graduate School of Medicine , Department of Pathology and Biology of Diseases
Contributors

Dataset List of 219-Konishi-CalciumIonDyn

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#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_Ly6G_N1
# 10469
Datast ID SuppFig6CD_Ly6G_N1
Dataset Kind Image data
Dataset Size 2.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_Ly6G_N2
# 10470
Datast ID SuppFig6CD_Ly6G_N2
Dataset Kind Image data
Dataset Size 310.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_Ly6G_N3
# 10471
Datast ID SuppFig6CD_Ly6G_N3
Dataset Kind Image data
Dataset Size 310.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_macrophage_clodronate_N1
# 10472
Datast ID SuppFig6CD_macrophage_clodronate_N1
Dataset Kind Image data
Dataset Size 372.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_macrophage_clodronate_N2
# 10473
Datast ID SuppFig6CD_macrophage_clodronate_N2
Dataset Kind Image data
Dataset Size 125.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_macrophage_clodronate_N3
# 10474
Datast ID SuppFig6CD_macrophage_clodronate_N3
Dataset Kind Image data
Dataset Size 122.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_macrophage_clodronate_N4
# 10475
Datast ID SuppFig6CD_macrophage_clodronate_N4
Dataset Kind Image data
Dataset Size 515.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NK_a-asialoGM1_N1
# 10476
Datast ID SuppFig6CD_NK_a-asialoGM1_N1
Dataset Kind Image data
Dataset Size 1.2 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NK_a-asialoGM1_N2
# 10477
Datast ID SuppFig6CD_NK_a-asialoGM1_N2
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NK_a-asialoGM1_N3
# 10478
Datast ID SuppFig6CD_NK_a-asialoGM1_N3
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NK_a-asialoGM1_N4
# 10479
Datast ID SuppFig6CD_NK_a-asialoGM1_N4
Dataset Kind Image data
Dataset Size 627.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NOGmice_N1
# 10480
Datast ID SuppFig6CD_NOGmice_N1
Dataset Kind Image data
Dataset Size 141.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NOGmice_N2
# 10481
Datast ID SuppFig6CD_NOGmice_N2
Dataset Kind Image data
Dataset Size 143.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_NOGmice_N3
# 10482
Datast ID SuppFig6CD_NOGmice_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_platelet_R300_N1
# 10483
Datast ID SuppFig6CD_platelet_R300_N1
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_platelet_R300_N2
# 10484
Datast ID SuppFig6CD_platelet_R300_N2
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_platelet_R300_N3
# 10485
Datast ID SuppFig6CD_platelet_R300_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_wildtype_mice_N1
# 10486
Datast ID SuppFig6CD_wildtype_mice_N1
Dataset Kind Image data
Dataset Size 1.2 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_wildtype_mice_N2
# 10487
Datast ID SuppFig6CD_wildtype_mice_N2
Dataset Kind Image data
Dataset Size 1.1 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig6CD_wildtype_mice_N3
# 10488
Datast ID SuppFig6CD_wildtype_mice_N3
Dataset Kind Image data
Dataset Size 2.1 GB
4D view
SSBD:OMERO
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