SSBD:database

Thumbnail for 219-Konishi-CalciumIonDyn

Summary of 219-Konishi-CalciumIonDyn

SSBD:database
219-Konishi-CalciumIonDyn
SSBD:database URL
https://ssbd.riken.jp/database/219-Konishi-CalciumIonDyn/
SSBD:repository
ssbd-repos-000219
SSBD:repository URL
https://ssbd.riken.jp/repository/219/
Title
Live imaging of Ca2+ concentration dynamics in BrafV600E melanoma cells.
Description
-
Release date
2023-02-21
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
170 ( Image datasets: 170, Quantitative data datasets: 0 )
Size of Datasets
81.4 GB ( Image datasets: 81.4 GB, Quantitative data datasets: 0 bytes )
Organism(s)
Canis lupus familiaris, Mus musculus
Cell lines(s)
BrafV600E cell, MDCK cell
Gene symbol(s)
Gnaq, Ptger1, Ptgfr, Ptgs1, Ptgs1. Ptgs2. Gnaq, Ptgs2, Tbxa2r, Tbxas1, Tbxas2r
Protein name(s)
NFAT, PKA
Datatype
-
Molecular Function (MF)
G protein-coupled receptor binding
Biological Process (BP)
Cellular Component (CC)
Biological Imaging Method
bioluminescence imaging, time lapse microscopy
X scale
0.828 micrometer/pixel, 0.637 micrometer/pixel, 0.441 micrometer/pixel, 0.454 micrometer/pixel, 0.414 micrometer/pixel, 0.638924 micrometer/pixel, 0.552 micrometer/pixel, NA
Y scale
0.828 micrometer/pixel, 0.637 micrometer/pixel, 0.441 micrometer/pixel, 0.454 micrometer/pixel, 0.414 micrometer/pixel, 0.638924 micrometer/pixel, 0.552 micrometer/pixel, NA
Z scale
1 micrometer/slice, NA, 5 micrometer/slice
T scale
15 sec per time interval, 3.07 sec per time interval, 6 sec per time interval, 3.08 sec per time interval, 3.02 sec per time interval, 60.22 sec per time interval, 1 min per time interval, 65.43 sec per time interval, 97.39 sec per time interval, 60.09 sec per time interval, 65.3 sec per time interval, 3.05 sec per time interval, 1 sec per time interval, 60.30 sec per time interval, 3.03 sec per time interval, 1.11 sec per time interval, 3.01 sec per time interval, 60.31 sec per time interval, 59.71 sec per time interval, 60.73 sec per time interval, 3 sec per time interval, 6.01 sec per time interval, 5.98 sec per time interval, 3.11 sec per time interval, 60.11 sec per time interval, 60.19 sec per time interval, 3.06 sec per time interval, 60.18 sec per time interval, 6.02 sec per time interval, 61.28 sec per time interval, 60.08 sec per time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Kenta Terai , kyoto University , Graduate School of Medicine , Department of Pathology and Biology of Diseases
Contributors

Dataset List of 219-Konishi-CalciumIonDyn

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#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4B_VEGFRi_N2
# 10369
Datast ID Figure4B_VEGFRi_N2
Dataset Kind Image data
Dataset Size 202.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4B_VEGFRi_N3
# 10370
Datast ID Figure4B_VEGFRi_N3
Dataset Kind Image data
Dataset Size 202.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4D_antiVEGF_N1
# 10371
Datast ID Figure4D_antiVEGF_N1
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4D_antiVEGF_N2
# 10372
Datast ID Figure4D_antiVEGF_N2
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4D_isotype_IgG_N1
# 10373
Datast ID Figure4D_isotype_IgG_N1
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4D_isotype_IgG_N2
# 10374
Datast ID Figure4D_isotype_IgG_N2
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4D_pre_treatment_N1
# 10375
Datast ID Figure4D_pre_treatment_N1
Dataset Kind Image data
Dataset Size 155.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4D_pre_treatment_N2
# 10376
Datast ID Figure4D_pre_treatment_N2
Dataset Kind Image data
Dataset Size 155.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1KO_N1
# 10377
Datast ID Figure5AB_Ptgs1KO_N1
Dataset Kind Image data
Dataset Size 1.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1KO_N2
# 10378
Datast ID Figure5AB_Ptgs1KO_N2
Dataset Kind Image data
Dataset Size 1.5 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1KO_N3
# 10379
Datast ID Figure5AB_Ptgs1KO_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1KO_N4
# 10380
Datast ID Figure5AB_Ptgs1KO_N4
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1KO_N5
# 10381
Datast ID Figure5AB_Ptgs1KO_N5
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1Ptgs2_DoubleKO_N1
# 10382
Datast ID Figure5AB_Ptgs1Ptgs2_DoubleKO_N1
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1Ptgs2_DoubleKO_N2
# 10383
Datast ID Figure5AB_Ptgs1Ptgs2_DoubleKO_N2
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs1Ptgs2_DoubleKO_N3
# 10384
Datast ID Figure5AB_Ptgs1Ptgs2_DoubleKO_N3
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs2KO_N1
# 10385
Datast ID Figure5AB_Ptgs2KO_N1
Dataset Kind Image data
Dataset Size 1.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs2KO_N2
# 10386
Datast ID Figure5AB_Ptgs2KO_N2
Dataset Kind Image data
Dataset Size 31.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs2KO_N3
# 10387
Datast ID Figure5AB_Ptgs2KO_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs2KO_N4
# 10388
Datast ID Figure5AB_Ptgs2KO_N4
Dataset Kind Image data
Dataset Size 412.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5AB_Ptgs2KO_N5
# 10389
Datast ID Figure5AB_Ptgs2KO_N5
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N1
# 10390
Datast ID Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N1
Dataset Kind Image data
Dataset Size 414.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N2
# 10391
Datast ID Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N2
Dataset Kind Image data
Dataset Size 416.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N3
# 10392
Datast ID Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N3
Dataset Kind Image data
Dataset Size 415.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N4
# 10393
Datast ID Figure5C_Mixed_WT_Ptgs1Ptgs2KO_N4
Dataset Kind Image data
Dataset Size 1.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_ParentalWT_N1
# 10394
Datast ID Figure5C_ParentalWT_N1
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_ParentalWT_N2
# 10395
Datast ID Figure5C_ParentalWT_N2
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_ParentalWT_N3
# 10396
Datast ID Figure5C_ParentalWT_N3
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Ptgs1Ptgs2_KO_N1
# 10397
Datast ID Figure5C_Ptgs1Ptgs2_KO_N1
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Ptgs1Ptgs2_KO_N2
# 10398
Datast ID Figure5C_Ptgs1Ptgs2_KO_N2
Dataset Kind Image data
Dataset Size 426.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5C_Ptgs1Ptgs2_KO_N3
# 10399
Datast ID Figure5C_Ptgs1Ptgs2_KO_N3
Dataset Kind Image data
Dataset Size 432.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5D_Gnaq_KO
# 10400
Datast ID Figure5D_Gnaq_KO
Dataset Kind Image data
Dataset Size 8.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5D_parental_negativecontrol
# 10401
Datast ID Figure5D_parental_negativecontrol
Dataset Kind Image data
Dataset Size 8.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure5D_Ptgs1Ptgs2_DKO
# 10402
Datast ID Figure5D_Ptgs1Ptgs2_DKO
Dataset Kind Image data
Dataset Size 11.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday1_N1
# 10403
Datast ID SuppFig1_Parentalday1_N1
Dataset Kind Image data
Dataset Size 1.5 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday1_N2
# 10404
Datast ID SuppFig1_Parentalday1_N2
Dataset Kind Image data
Dataset Size 141.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday1_N3
# 10405
Datast ID SuppFig1_Parentalday1_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday2_N1
# 10406
Datast ID SuppFig1_Parentalday2_N1
Dataset Kind Image data
Dataset Size 190.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday2_N2
# 10407
Datast ID SuppFig1_Parentalday2_N2
Dataset Kind Image data
Dataset Size 190.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday2_N3
# 10408
Datast ID SuppFig1_Parentalday2_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday3_N1
# 10409
Datast ID SuppFig1_Parentalday3_N1
Dataset Kind Image data
Dataset Size 1004.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday3_N2
# 10410
Datast ID SuppFig1_Parentalday3_N2
Dataset Kind Image data
Dataset Size 51.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday3_N3
# 10411
Datast ID SuppFig1_Parentalday3_N3
Dataset Kind Image data
Dataset Size 292.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday3_N4
# 10412
Datast ID SuppFig1_Parentalday3_N4
Dataset Kind Image data
Dataset Size 567.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday3_N5
# 10413
Datast ID SuppFig1_Parentalday3_N5
Dataset Kind Image data
Dataset Size 283.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday10_N1
# 10414
Datast ID SuppFig1_Parentalday10_N1
Dataset Kind Image data
Dataset Size 105.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday10_N2
# 10415
Datast ID SuppFig1_Parentalday10_N2
Dataset Kind Image data
Dataset Size 104.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday10_N3
# 10416
Datast ID SuppFig1_Parentalday10_N3
Dataset Kind Image data
Dataset Size 206.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig1_Parentalday14_N1
# 10417
Datast ID SuppFig1_Parentalday14_N1
Dataset Kind Image data
Dataset Size 31.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset SuppFig3A_4T1_Gqinhibitor_N1
# 10418
Datast ID SuppFig3A_4T1_Gqinhibitor_N1
Dataset Kind Image data
Dataset Size 616.8 MB
4D view
SSBD:OMERO
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