SSBD:database

Thumbnail for 194-Obashi-SpineDyn

Summary of 194-Obashi-SpineDyn

SSBD:database
194-Obashi-SpineDyn
SSBD:database URL
https://ssbd.riken.jp/database/194-Obashi-SpineDyn/
SSBD:repository
ssbd-repos-000194
SSBD:repository URL
https://ssbd.riken.jp/repository/194/
Title
Microscopy images or BDML file for quantitative information about actin polymers mobility in mouse dendritic spines.
Description
-
Release date
2022-03-31
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
21 ( Image datasets: 21, Quantitative data datasets: 0 )
Size of Datasets
9.4 MB ( Image datasets: 9.4 MB, Quantitative data datasets: 0 bytes )
Organism(s)
Mus musculus
Protein name(s)
ADF, Tiam1QK, cofilin
Protein tag(s)
EGFP, EGFP5, mCherry, mRFP
Datatype
-
Molecular Function (MF)
NA, signaling molecule
Biological Process (BP)
actin polymerization, stimulation of synapse structural plasticity
Cellular Component (CC)
dendritic spine
Biological Imaging Method
two-photon laser scanning microscopy, structured illumination microscopy, time lapse microscopy
X scale
0.138 micrometer/pixel, 0.069 micrometer/pixel, 0.032 micrometer/pixel, 0.206 micrometer/pixel, 0.103 micrometer/pixel
Y scale
0.138 micrometer/pixel, 0.069 micrometer/pixel, 0.032 micrometer/pixel, 0.206 micrometer/pixel, 0.103 micrometer/pixel
Z scale
-
T scale
-20, 1, 10, 30 minutes, single time point (C1, C2, C1 mask, C2 mask), -10, 1, 15, 30 minutes, -11, 1, 5, 15, 30 minutes, -20, -10, -1, 1, 15, 30 minutes
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Shigeo Okabe , the University of Tokyo, Tokyo , Department of Cellular Neurobiology, Graduate School of Medicine
Contributors
Kazuki Obashi

Dataset List of 194-Obashi-SpineDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig3A_MNI-Glu-Minus
# 7483
Datast ID Fig3A_MNI-Glu-Minus
Dataset Kind Image data
Dataset Size 193.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig3A_MNI-Glu-Plus
# 7484
Datast ID Fig3A_MNI-Glu-Plus
Dataset Kind Image data
Dataset Size 897.2 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig3F_control-Sh
# 7485
Datast ID Fig3F_control-Sh
Dataset Kind Image data
Dataset Size 769.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig3F_resistance_cofilin
# 7486
Datast ID Fig3F_resistance_cofilin
Dataset Kind Image data
Dataset Size 193.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig3F_Sh_cofilin
# 7487
Datast ID Fig3F_Sh_cofilin
Dataset Kind Image data
Dataset Size 769.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig4A_SIM_sLTP
# 7488
Datast ID Fig4A_SIM_sLTP
Dataset Kind Image data
Dataset Size 2.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_CaMK_EGFP_C1
# 7489
Datast ID Fig5A_CaMK_EGFP_C1
Dataset Kind Image data
Dataset Size 161.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_CaMK_EGFP_C2
# 7490
Datast ID Fig5A_CaMK_EGFP_C2
Dataset Kind Image data
Dataset Size 161.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_cofilin_EGFP_C1
# 7491
Datast ID Fig5A_cofilin_EGFP_C1
Dataset Kind Image data
Dataset Size 193.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_cofilin_EGFP_C2
# 7492
Datast ID Fig5A_cofilin_EGFP_C2
Dataset Kind Image data
Dataset Size 193.3 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_Tiam_delataPHnCCEx_EGFP_C1
# 7493
Datast ID Fig5A_Tiam_delataPHnCCEx_EGFP_C1
Dataset Kind Image data
Dataset Size 161.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_Tiam_delataPHnCCEx_EGFP_C2
# 7494
Datast ID Fig5A_Tiam_delataPHnCCEx_EGFP_C2
Dataset Kind Image data
Dataset Size 161.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_Tiam_EGFP_C1
# 7495
Datast ID Fig5A_Tiam_EGFP_C1
Dataset Kind Image data
Dataset Size 769.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_Tiam_EGFP_C2
# 7496
Datast ID Fig5A_Tiam_EGFP_C2
Dataset Kind Image data
Dataset Size 769.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_Tiam_sh-ADF_EGFP_C1
# 7497
Datast ID Fig5A_Tiam_sh-ADF_EGFP_C1
Dataset Kind Image data
Dataset Size 769.3 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5A_Tiam_sh-ADF_EGFP_C2
# 7498
Datast ID Fig5A_Tiam_sh-ADF_EGFP_C2
Dataset Kind Image data
Dataset Size 769.3 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6A_delta_after_stimulus
# 7499
Datast ID Fig6A_delta_after_stimulus
Dataset Kind Image data
Dataset Size 98.5 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6A_delta_without_stimulus
# 7500
Datast ID Fig6A_delta_without_stimulus
Dataset Kind Image data
Dataset Size 98.5 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6A_EGFP_after_stimulus
# 7501
Datast ID Fig6A_EGFP_after_stimulus
Dataset Kind Image data
Dataset Size 98.5 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6A_Tiam_after_stimulus
# 7502
Datast ID Fig6A_Tiam_after_stimulus
Dataset Kind Image data
Dataset Size 98.5 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6A_Tiam_without_stimulus
# 7503
Datast ID Fig6A_Tiam_without_stimulus
Dataset Kind Image data
Dataset Size 98.5 KB
4D view
SSBD:OMERO
Download BDML
Download Image data