SSBD:database

Thumbnail for 139-Kishimoto-TracheaDev

Summary of 139-Kishimoto-TracheaDev

SSBD:database
139-Kishimoto-TracheaDev
SSBD:database URL
https://ssbd.riken.jp/database/139-Kishimoto-TracheaDev/
SSBD:repository
ssbd-repos-000139
SSBD:repository URL
https://ssbd.riken.jp/repository/139/
Title
Image data of trachea and esophagus formation in the mouse embryo
Description
-
Release date
2024-11-25
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
85 ( Image datasets: 85, Quantitative data datasets: 0 )
Size of Datasets
5.3 GB ( Image datasets: 5.3 GB, Quantitative data datasets: 0 bytes )
Organism(s)
Mus musculus
Datatype
-
Molecular Function (MF)
Biological Process (BP)
branching morphogenesis of an epithelial tube
Cellular Component (CC)
cytoskeleton, nucleus
Biological Imaging Method
confocal microscopy, multi-photon microscopy, scanning electron microscopy, time lapse microscopy
X scale
7.8948 micrometer/pixel, 1.3284 micrometer/pixel, 2.6607 micrometer/pixel, 0.319149 micrometer/pixel, 0.5271531 micrometer/pixel, 4.0323 micrometer/pixel, 0.8302658　micrometer/pixel, 9.901 micrometer/pixel, NA, 13.5026 micrometer/pixel, 0.2635765 micrometer/pixel, 0.3275111 micrometer/pixel, 3.1646 micrometer/pixel, 0.4385965 micrometer/pixel, 0.415 micrometer/pixel, 0.3333333 micrometer/pixel, 3.1746 micrometer/pixel, 10.0 micrometer/pixel, 0.3321064 micrometer/pixel, 0.3321063　micrometer/pixel, 0.6642131 micrometer/pixel, 0.326087 micrometer/pixel, 0.3322259 micrometer/pixel, 6.3573 micrometer/pixel, 5.0125 micrometer/pixel, 3.2051 micrometer/pixel, 2.6569 micrometer/pixel
Y scale
7.8948 micrometer/pixel, 1.3284 micrometer/pixel, 2.6607 micrometer/pixel, 0.319149 micrometer/pixel, 0.5271531 micrometer/pixel, 4.0323 micrometer/pixel, 0.8302658　micrometer/pixel, 9.901 micrometer/pixel, NA, 13.5026 micrometer/pixel, 0.2635765 micrometer/pixel, 0.3275111 micrometer/pixel, 3.1646 micrometer/pixel, 0.4385965 micrometer/pixel, 0.415 micrometer/pixel, 0.3333333 micrometer/pixel, 3.1746 micrometer/pixel, 10.0 micrometer/pixel, 0.3321064 micrometer/pixel, 0.3321063　micrometer/pixel, 0.6642131 micrometer/pixel, 0.326087 micrometer/pixel, 0.3322259 micrometer/pixel, 6.3573 micrometer/pixel, 5.0125 micrometer/pixel, 3.2051 micrometer/pixel, 2.6569 micrometer/pixel
Z scale
1 micrometer/slice, 1.2895111　micrometer/pixel, 2 micrometer/slice, 3.4529906　micrometer/pixel, 1 micrometer/pixel, NA
T scale
NA, 1 hour per time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Mitsuru Morimoto , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Lung Development
Contributors

Dataset List of 139-Kishimoto-TracheaDev

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E12.5_Dorsal
# 11643
Datast ID FigureS12A_Foxg1CreSox9FF_E12.5_Dorsal
Dataset Kind Image data
Dataset Size 126.2 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E12.5_Ventral
# 11644
Datast ID FigureS12A_Foxg1CreSox9FF_E12.5_Ventral
Dataset Kind Image data
Dataset Size 120.2 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E14.5_Dorsal
# 11645
Datast ID FigureS12A_Foxg1CreSox9FF_E14.5_Dorsal
Dataset Kind Image data
Dataset Size 220.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E14.5_Ventral
# 11646
Datast ID FigureS12A_Foxg1CreSox9FF_E14.5_Ventral
Dataset Kind Image data
Dataset Size 213.9 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E16.5_Dorsal
# 11647
Datast ID FigureS12A_Foxg1CreSox9FF_E16.5_Dorsal
Dataset Kind Image data
Dataset Size 371.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E16.5_Ventral
# 11648
Datast ID FigureS12A_Foxg1CreSox9FF_E16.5_Ventral
Dataset Kind Image data
Dataset Size 365.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E18.5_Dorsal
# 11649
Datast ID FigureS12A_Foxg1CreSox9FF_E18.5_Dorsal
Dataset Kind Image data
Dataset Size 317.9 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS12A_Foxg1CreSox9FF_E18.5_Ventral
# 11650
Datast ID FigureS12A_Foxg1CreSox9FF_E18.5_Ventral
Dataset Kind Image data
Dataset Size 311.9 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset FigureS13B_SHHCreR26RRG_E14.5
# 11651
Datast ID FigureS13B_SHHCreR26RRG_E14.5
Dataset Kind Image data
Dataset Size 642.9 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset FigureS13B_SHHCreR26RRG_E16.5
# 11652
Datast ID FigureS13B_SHHCreR26RRG_E16.5
Dataset Kind Image data
Dataset Size 722.4 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS13B_SHHCreR26RRG_E18.5
# 11653
Datast ID FigureS13B_SHHCreR26RRG_E18.5
Dataset Kind Image data
Dataset Size 585.1 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset FigureS15A_E14.5_CDH1
# 11654
Datast ID FigureS15A_E14.5_CDH1
Dataset Kind Image data
Dataset Size 47.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E14.5_CDH1_ZO1
# 11655
Datast ID FigureS15A_E14.5_CDH1_ZO1
Dataset Kind Image data
Dataset Size 47.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E14.5_CTNNB1
# 11656
Datast ID FigureS15A_E14.5_CTNNB1
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E14.5_SCRIB
# 11657
Datast ID FigureS15A_E14.5_SCRIB
Dataset Kind Image data
Dataset Size 41.6 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E16.5_CDH1
# 11658
Datast ID FigureS15A_E16.5_CDH1
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E16.5_CDH1_ZO1
# 11659
Datast ID FigureS15A_E16.5_CDH1_ZO1
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E16.5_CTNNB1
# 11660
Datast ID FigureS15A_E16.5_CTNNB1
Dataset Kind Image data
Dataset Size 41.6 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E16.5_SCRIB
# 11661
Datast ID FigureS15A_E16.5_SCRIB
Dataset Kind Image data
Dataset Size 41.6 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E18.5_CDH1
# 11662
Datast ID FigureS15A_E18.5_CDH1
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset FigureS15A_E18.5_CDH1_ZO1
# 11663
Datast ID FigureS15A_E18.5_CDH1_ZO1
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15A_E18.5_CTNNB1
# 11664
Datast ID FigureS15A_E18.5_CTNNB1
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15A_E18.5_SCRIB
# 11665
Datast ID FigureS15A_E18.5_SCRIB
Dataset Kind Image data
Dataset Size 41.6 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E14.5_atubulin
# 11666
Datast ID FigureS15B_E14.5_atubulin
Dataset Kind Image data
Dataset Size 47.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E14.5_Factin
# 11667
Datast ID FigureS15B_E14.5_Factin
Dataset Kind Image data
Dataset Size 192.3 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E14.5_pMLC2
# 11668
Datast ID FigureS15B_E14.5_pMLC2
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E14.5_ppMLC2
# 11669
Datast ID FigureS15B_E14.5_ppMLC2
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E16.5_atubulin
# 11670
Datast ID FigureS15B_E16.5_atubulin
Dataset Kind Image data
Dataset Size 41.6 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E16.5_Factin
# 11671
Datast ID FigureS15B_E16.5_Factin
Dataset Kind Image data
Dataset Size 192.3 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E16.5_pMLC2
# 11672
Datast ID FigureS15B_E16.5_pMLC2
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E16.5_ppMLC2
# 11673
Datast ID FigureS15B_E16.5_ppMLC2
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigureS15B_E18.5_atubulin
# 11674
Datast ID FigureS15B_E18.5_atubulin
Dataset Kind Image data
Dataset Size 24.6 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15B_E18.5_Factin
# 11675
Datast ID FigureS15B_E18.5_Factin
Dataset Kind Image data
Dataset Size 192.3 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15B_E18.5_pMLC2
# 11676
Datast ID FigureS15B_E18.5_pMLC2
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FigureS15B_E18.5_ppMLC2
# 11677
Datast ID FigureS15B_E18.5_ppMLC2
Dataset Kind Image data
Dataset Size 41.7 KB
4D view
SSBD:OMERO
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