Summary of 87-CorneliaKoeverle-SpineDyn

SSBD:database
SSBD:database URL
Title
Images and time-lapse images of spine formation in wild type and CaMKIIaKI hippocampal neurons.
Description
-
Relase date
2018-11-14
Updated date
-
License
CC BY
Kind
Quantitative data, Image data based on Experiment
Number of Datasets
32 ( Image datasets: 30, Quantitative data datasets: 2 )
Size of Datasets
204.9 MB ( Image datasets: 204.9 MB, Quantitative data datasets: 0 bytes )

Organism(s)
M. musculus
Protein name(s)
Rap1
Protein tag(s)
DsRed2, PAGFP, RFP

Datatype
spine dynamics
Molecular Function (MF)
Biological Process (BP)
spine apparatus formation
Cellular Component (CC)
neuron spine, spine synapse
Biological Imaging Method
-
XYZ Scale
XY: 0.104 micrometer/pixel, Z: 0.700 micrometer/slice, NA, XY: 0.0932 micrometer/pixel, Z: 0.400 micrometer/slice, XY: 0.082 micrometer/pixel, Z: 0.500 micrometer/slice, XY: 0.072 micrometer/pixel, Z: 0.500 micrometer/slice, XY: 0.155 micrometer/pixel, Z: 0.400 micrometer/slice
T scale
1800 second for each time interval, 15 second for each time interval, 1 day for each time interval, NA

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FluoView FV300, Olympus FluoView FV1000
Detector model
-
Objective model
LUMPlanFL N X60 1.0 Water, PlanApo X60 1.10 Oil LSM (Olympus), LUMPlanFl/IR X60 0.9 Water
Filter set
-

Related paper(s)

Solveigh Cornelia Koeberle, Shinji Tanaka, Toshihiko Kuriu, Hirohide Iwasaki, Andreas Koeberle, Alexander Schulz, Dario-Lucas Helbing, Yoko Yamagata, Helen Morrison, Shigeo Okabe (2017) Developmental stage-dependent regulation of spine formation by calcium-calmodulin-dependent protein kinase IIalpha and Rap1., Scientific reports, Volume 7, Number 1, pp. 13409

Published in 2017 Oct 17 (Electronic publication in Oct. 17, 2017, midnight )

(Abstract) The roles of calcium-calmodulin-dependent protein kinase II-alpha (CaMKIIalpha) in the expression of long-term synaptic plasticity in the adult brain have been extensively studied. However, how increased CaMKIIalpha activity controls the maturation of neuronal circuits remains incompletely understood. Herein, we show that pyramidal neurons without CaMKIIalpha activity upregulate the rate of spine addition, resulting in elevated spine density. Genetic elimination of CaMKIIalpha activity specifically eliminated the observed maturation-dependent suppression of spine formation. Enhanced spine formation was associated with the stabilization of actin in the spine and could be reversed by increasing the activity of the small GTPase Rap1. CaMKIIalpha activity was critical in the phosphorylation of synaptic Ras GTPase-activating protein (synGAP), the dispersion of synGAP from postsynaptic sites, and the activation of postsynaptic Rap1. CaMKIIalpha is already known to be essential in learning and memory, but our findings suggest that CaMKIIalpha plays an important activity-dependent role in restricting spine density during postnatal development.
(MeSH Terms)

Contact
Shigeo Okabe , University of Tokyo , Department of Cellular Neurobiology, Graduate School of Medicine
Contributors
Solveigh Cornelia Koeberle, Shinji Tanaka, Toshihiko Kuriu, Hirohide Iwasaki, Andreas Koeberle, Alexander Schulz, Dario-Lucas Helbing, Yoko Yamagata, Helen Morrison, Shigeo Okabe


Dataset List of 87-CorneliaKoeverle-SpineDyn

#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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# 4108
Datast ID fig1a_KI_apical
Dataset Kind Image data
Dataset Size 165.2 KB
4D view
SSBD:OMERO
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# 4109
Datast ID fig1a_KI_basal
Dataset Kind Image data
Dataset Size 172.8 KB
4D view
SSBD:OMERO
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# 4110
Datast ID fig1a_KI_oblique
Dataset Kind Image data
Dataset Size 184.2 KB
4D view
SSBD:OMERO
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# 4111
Datast ID fig1a_WT_apical
Dataset Kind Image data
Dataset Size 157.7 KB
4D view
SSBD:OMERO
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# 4112
Datast ID fig1a_WT_basal
Dataset Kind Image data
Dataset Size 175.0 KB
4D view
SSBD:OMERO
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# 4113
Datast ID fig1a_WT_oblique
Dataset Kind Image data
Dataset Size 178.4 KB
4D view
SSBD:OMERO
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# 4114
Datast ID fig2ab_KI_day1
Dataset Kind Image data
Dataset Size 3.6 MB
4D view
SSBD:OMERO
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# 4115
Datast ID fig2ab_KI_day2
Dataset Kind Image data
Dataset Size 5.6 MB
4D view
SSBD:OMERO
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# 4116
Datast ID fig2ab_WT_day1
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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# 4117
Datast ID fig2ab_WT_day2
Dataset Kind Image data
Dataset Size 5.9 MB
4D view
SSBD:OMERO
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# 4118
Datast ID fig3a_KN92_19DIV_1
Dataset Kind Image data
Dataset Size 13.0 MB
4D view
SSBD:OMERO
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# 4119
Datast ID fig3a_KN92_19DIV_2
Dataset Kind Image data
Dataset Size 8.5 MB
4D view
SSBD:OMERO
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# 4120
Datast ID fig3a_KN92_20DIV
Dataset Kind Image data
Dataset Size 10.0 MB
4D view
SSBD:OMERO
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# 4121
Datast ID fig3a_KN93_19DIV_1
Dataset Kind Image data
Dataset Size 10.5 MB
4D view
SSBD:OMERO
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# 4122
Datast ID fig3a_KN93_19DIV_2
Dataset Kind Image data
Dataset Size 8.0 MB
4D view
SSBD:OMERO
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# 4123
Datast ID fig3a_KN93_20DIV
Dataset Kind Image data
Dataset Size 9.5 MB
4D view
SSBD:OMERO
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# 4124
Dataset Kind Image data
Dataset Size 16.0 MB
4D view
SSBD:OMERO
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# 4125
Dataset Kind Image data
Dataset Size 12.0 MB
4D view
SSBD:OMERO
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# 4126
Dataset Kind Image data
Dataset Size 13.0 MB
4D view
SSBD:OMERO
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# 4127
Datast ID fig3c_K42R_14DIV_1
Dataset Kind Image data
Dataset Size 13.0 MB
4D view
SSBD:OMERO
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# 4128
Datast ID fig3c_K42R_14DIV_2
Dataset Kind Image data
Dataset Size 10.0 MB
4D view
SSBD:OMERO
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# 4129
Datast ID fig3c_K42R_16DIV
Dataset Kind Image data
Dataset Size 15.0 MB
4D view
SSBD:OMERO
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# 4130
Datast ID fig5a_control_1
Dataset Kind Image data
Dataset Size 5.3 MB
4D view
SSBD:OMERO
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# 4131
Datast ID fig5a_control_2
Dataset Kind Image data
Dataset Size 6.8 MB
4D view
SSBD:OMERO
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# 4132
Datast ID fig5a_control_3
Dataset Kind Image data
Dataset Size 6.8 MB
4D view
SSBD:OMERO
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# 4133
Datast ID fig5a_KN93_1
Dataset Kind Image data
Dataset Size 9.8 MB
4D view
SSBD:OMERO
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# 4134
Datast ID fig5a_KN93_2
Dataset Kind Image data
Dataset Size 6.8 MB
4D view
SSBD:OMERO
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# 4135
Datast ID fig5a_KN93_3
Dataset Kind Image data
Dataset Size 9.8 MB
4D view
SSBD:OMERO
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# 4136
Datast ID fig6c_KI
Dataset Kind Image data
Dataset Size 568.5 KB
4D view
SSBD:OMERO
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# 4137
Datast ID fig6c_WT
Dataset Kind Image data
Dataset Size 568.5 KB
4D view
SSBD:OMERO
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