SSBD:database

Thumbnail for 225-Seiriki-WholeBrainDev

Summary of 225-Seiriki-WholeBrainDev

SSBD:database
225-Seiriki-WholeBrainDev
SSBD:database URL
https://ssbd.riken.jp/database/225-Seiriki-WholeBrainDev/
SSBD:repository
ssbd-repos-000225
SSBD:repository URL
https://ssbd.riken.jp/repository/225/
Title
Whole-brain imaging of mouse using block-face serial microscopy tomography (FAST).
Description
-
Release date
2022-11-23
Updated date
-
License
CC BY-NC-SA
Kind
Image data based on Experiment
Number of Datasets
415 ( Image datasets: 415, Quantitative data datasets: 0 )
Size of Datasets
3.2 TB ( Image datasets: 3.2 TB, Quantitative data datasets: 0 bytes )
Organism(s)
Mus musculus
Protein tag(s)
dyes
Datatype
-
Molecular Function (MF)
Biological Process (BP)
brain development
Cellular Component (CC)
Biological Imaging Method
whole-brain imaging, block-face serial microscopy tomography (FAST), fluorescence microscopy
X scale
0.7 micrometer/pixel, 1.0 micrometer/pixel
Y scale
0.7 micrometer/pixel, 1.0 micrometer/pixel
Z scale
5 micrometer/pixel
T scale
-
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Atsushi Kasai, Hitoshi Hashimoto , Osaka University, Osaka University , Graduate School of Pharmaceutical Sciences , Graduate School of Pharmaceutical Sciences , Laboratory of Molecular Neuropharmacology , Laboratory of Molecular Neuropharmacology
Contributors

Dataset List of 225-Seiriki-WholeBrainDev

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging35_20180328_125933
# 7993
Datast ID Fig6_Whole_brain_imaging35_20180328_125933
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging36_20180328_130345
# 7994
Datast ID Fig6_Whole_brain_imaging36_20180328_130345
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging37_20180328_130757
# 7995
Datast ID Fig6_Whole_brain_imaging37_20180328_130757
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging38_20180328_131210
# 7996
Datast ID Fig6_Whole_brain_imaging38_20180328_131210
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging39_20180328_131623
# 7997
Datast ID Fig6_Whole_brain_imaging39_20180328_131623
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging40_20180328_132038
# 7998
Datast ID Fig6_Whole_brain_imaging40_20180328_132038
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging41_20180328_132451
# 7999
Datast ID Fig6_Whole_brain_imaging41_20180328_132451
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging42_20180328_132902
# 8000
Datast ID Fig6_Whole_brain_imaging42_20180328_132902
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging43_20180328_133321
# 8001
Datast ID Fig6_Whole_brain_imaging43_20180328_133321
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging44_20180328_133737
# 8002
Datast ID Fig6_Whole_brain_imaging44_20180328_133737
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging45_20180328_134152
# 8003
Datast ID Fig6_Whole_brain_imaging45_20180328_134152
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging46_20180328_134605
# 8004
Datast ID Fig6_Whole_brain_imaging46_20180328_134605
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging47_20180328_135018
# 8005
Datast ID Fig6_Whole_brain_imaging47_20180328_135018
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging48_20180328_135430
# 8006
Datast ID Fig6_Whole_brain_imaging48_20180328_135430
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging49_20180328_135840
# 8007
Datast ID Fig6_Whole_brain_imaging49_20180328_135840
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging50_20180328_140252
# 8008
Datast ID Fig6_Whole_brain_imaging50_20180328_140252
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging51_20180328_140702
# 8009
Datast ID Fig6_Whole_brain_imaging51_20180328_140702
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging52_20180328_141114
# 8010
Datast ID Fig6_Whole_brain_imaging52_20180328_141114
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging53_20180328_141527
# 8011
Datast ID Fig6_Whole_brain_imaging53_20180328_141527
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging54_20180328_141943
# 8012
Datast ID Fig6_Whole_brain_imaging54_20180328_141943
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging55_20180328_142358
# 8013
Datast ID Fig6_Whole_brain_imaging55_20180328_142358
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging56_20180328_142808
# 8014
Datast ID Fig6_Whole_brain_imaging56_20180328_142808
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging57_20180328_143221
# 8015
Datast ID Fig6_Whole_brain_imaging57_20180328_143221
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging58_20180328_143636
# 8016
Datast ID Fig6_Whole_brain_imaging58_20180328_143636
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging59_20180328_144049
# 8017
Datast ID Fig6_Whole_brain_imaging59_20180328_144049
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging60_20180328_144504
# 8018
Datast ID Fig6_Whole_brain_imaging60_20180328_144504
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging61_20180328_144915
# 8019
Datast ID Fig6_Whole_brain_imaging61_20180328_144915
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging62_20180328_145336
# 8020
Datast ID Fig6_Whole_brain_imaging62_20180328_145336
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging63_20180328_145753
# 8021
Datast ID Fig6_Whole_brain_imaging63_20180328_145753
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging64_20180328_150214
# 8022
Datast ID Fig6_Whole_brain_imaging64_20180328_150214
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging65_20180328_150628
# 8023
Datast ID Fig6_Whole_brain_imaging65_20180328_150628
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging66_20180328_151037
# 8024
Datast ID Fig6_Whole_brain_imaging66_20180328_151037
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging67_20180328_151450
# 8025
Datast ID Fig6_Whole_brain_imaging67_20180328_151450
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging68_20180328_151901
# 8026
Datast ID Fig6_Whole_brain_imaging68_20180328_151901
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging69_20180328_152313
# 8027
Datast ID Fig6_Whole_brain_imaging69_20180328_152313
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging70_20180328_152727
# 8028
Datast ID Fig6_Whole_brain_imaging70_20180328_152727
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging71_20180328_153136
# 8029
Datast ID Fig6_Whole_brain_imaging71_20180328_153136
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging72_20180328_153547
# 8030
Datast ID Fig6_Whole_brain_imaging72_20180328_153547
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging73_20180328_153955
# 8031
Datast ID Fig6_Whole_brain_imaging73_20180328_153955
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging74_20180328_154407
# 8032
Datast ID Fig6_Whole_brain_imaging74_20180328_154407
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging75_20180328_154820
# 8033
Datast ID Fig6_Whole_brain_imaging75_20180328_154820
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging76_20180328_155227
# 8034
Datast ID Fig6_Whole_brain_imaging76_20180328_155227
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging77_20180328_155639
# 8035
Datast ID Fig6_Whole_brain_imaging77_20180328_155639
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging78_20180328_160050
# 8036
Datast ID Fig6_Whole_brain_imaging78_20180328_160050
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging79_20180328_160502
# 8037
Datast ID Fig6_Whole_brain_imaging79_20180328_160502
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging80_20180328_160913
# 8038
Datast ID Fig6_Whole_brain_imaging80_20180328_160913
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging81_20180328_161325
# 8039
Datast ID Fig6_Whole_brain_imaging81_20180328_161325
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging82_20180328_161738
# 8040
Datast ID Fig6_Whole_brain_imaging82_20180328_161738
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging83_20180328_162143
# 8041
Datast ID Fig6_Whole_brain_imaging83_20180328_162143
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging84_20180328_162544
# 8042
Datast ID Fig6_Whole_brain_imaging84_20180328_162544
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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