SSBD:database

Thumbnail for 225-Seiriki-WholeBrainDev

Summary of 225-Seiriki-WholeBrainDev

SSBD:database
225-Seiriki-WholeBrainDev
SSBD:database URL
https://ssbd.riken.jp/database/225-Seiriki-WholeBrainDev/
SSBD:repository
ssbd-repos-000225
SSBD:repository URL
https://ssbd.riken.jp/repository/225/
Title
Whole-brain imaging of mouse using block-face serial microscopy tomography (FAST).
Description
-
Release date
2022-11-23
Updated date
-
License
CC BY-NC-SA
Kind
Image data based on Experiment
Number of Datasets
415 ( Image datasets: 415, Quantitative data datasets: 0 )
Size of Datasets
3.2 TB ( Image datasets: 3.2 TB, Quantitative data datasets: 0 bytes )
Organism(s)
Mus musculus
Protein tag(s)
dyes
Datatype
-
Molecular Function (MF)
Biological Process (BP)
brain development
Cellular Component (CC)
Biological Imaging Method
whole-brain imaging, block-face serial microscopy tomography (FAST), fluorescence microscopy
X scale
0.7 micrometer/pixel, 1.0 micrometer/pixel
Y scale
0.7 micrometer/pixel, 1.0 micrometer/pixel
Z scale
5 micrometer/pixel
T scale
-
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Atsushi Kasai, Hitoshi Hashimoto , Osaka University, Osaka University , Graduate School of Pharmaceutical Sciences , Graduate School of Pharmaceutical Sciences , Laboratory of Molecular Neuropharmacology , Laboratory of Molecular Neuropharmacology
Contributors

Dataset List of 225-Seiriki-WholeBrainDev

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging150_20180411_61251
# 7943
Datast ID Fig5_Whole_brain_imaging150_20180411_61251
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging151_20180411_61530
# 7944
Datast ID Fig5_Whole_brain_imaging151_20180411_61530
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging152_20180411_61809
# 7945
Datast ID Fig5_Whole_brain_imaging152_20180411_61809
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging153_20180411_62049
# 7946
Datast ID Fig5_Whole_brain_imaging153_20180411_62049
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging154_20180411_62330
# 7947
Datast ID Fig5_Whole_brain_imaging154_20180411_62330
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging155_20180411_62609
# 7948
Datast ID Fig5_Whole_brain_imaging155_20180411_62609
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging156_20180411_62851
# 7949
Datast ID Fig5_Whole_brain_imaging156_20180411_62851
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging157_20180411_63130
# 7950
Datast ID Fig5_Whole_brain_imaging157_20180411_63130
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging158_20180411_63408
# 7951
Datast ID Fig5_Whole_brain_imaging158_20180411_63408
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging159_20180411_63650
# 7952
Datast ID Fig5_Whole_brain_imaging159_20180411_63650
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging160_20180411_63928
# 7953
Datast ID Fig5_Whole_brain_imaging160_20180411_63928
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging161_20180411_64208
# 7954
Datast ID Fig5_Whole_brain_imaging161_20180411_64208
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging162_20180411_64446
# 7955
Datast ID Fig5_Whole_brain_imaging162_20180411_64446
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging163_20180411_64725
# 7956
Datast ID Fig5_Whole_brain_imaging163_20180411_64725
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging164_20180411_65003
# 7957
Datast ID Fig5_Whole_brain_imaging164_20180411_65003
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging_20180328_103324
# 7958
Datast ID Fig6_Whole_brain_imaging_20180328_103324
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging1_20180328_103721
# 7959
Datast ID Fig6_Whole_brain_imaging1_20180328_103721
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging2_20180328_104120
# 7960
Datast ID Fig6_Whole_brain_imaging2_20180328_104120
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging3_20180328_104525
# 7961
Datast ID Fig6_Whole_brain_imaging3_20180328_104525
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging4_20180328_104936
# 7962
Datast ID Fig6_Whole_brain_imaging4_20180328_104936
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging5_20180328_105344
# 7963
Datast ID Fig6_Whole_brain_imaging5_20180328_105344
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging6_20180328_105756
# 7964
Datast ID Fig6_Whole_brain_imaging6_20180328_105756
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging7_20180328_110205
# 7965
Datast ID Fig6_Whole_brain_imaging7_20180328_110205
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging8_20180328_110614
# 7966
Datast ID Fig6_Whole_brain_imaging8_20180328_110614
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging9_20180328_111027
# 7967
Datast ID Fig6_Whole_brain_imaging9_20180328_111027
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging10_20180328_111436
# 7968
Datast ID Fig6_Whole_brain_imaging10_20180328_111436
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging11_20180328_111848
# 7969
Datast ID Fig6_Whole_brain_imaging11_20180328_111848
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging12_20180328_112257
# 7970
Datast ID Fig6_Whole_brain_imaging12_20180328_112257
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging13_20180328_112710
# 7971
Datast ID Fig6_Whole_brain_imaging13_20180328_112710
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging14_20180328_113123
# 7972
Datast ID Fig6_Whole_brain_imaging14_20180328_113123
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging15_20180328_113532
# 7973
Datast ID Fig6_Whole_brain_imaging15_20180328_113532
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging16_20180328_113946
# 7974
Datast ID Fig6_Whole_brain_imaging16_20180328_113946
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging17_20180328_114359
# 7975
Datast ID Fig6_Whole_brain_imaging17_20180328_114359
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging18_20180328_114811
# 7976
Datast ID Fig6_Whole_brain_imaging18_20180328_114811
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging19_20180328_115224
# 7977
Datast ID Fig6_Whole_brain_imaging19_20180328_115224
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging20_20180328_115633
# 7978
Datast ID Fig6_Whole_brain_imaging20_20180328_115633
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging21_20180328_120046
# 7979
Datast ID Fig6_Whole_brain_imaging21_20180328_120046
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging22_20180328_120456
# 7980
Datast ID Fig6_Whole_brain_imaging22_20180328_120456
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging23_20180328_120908
# 7981
Datast ID Fig6_Whole_brain_imaging23_20180328_120908
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging24_20180328_121319
# 7982
Datast ID Fig6_Whole_brain_imaging24_20180328_121319
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging25_20180328_121730
# 7983
Datast ID Fig6_Whole_brain_imaging25_20180328_121730
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging26_20180328_122142
# 7984
Datast ID Fig6_Whole_brain_imaging26_20180328_122142
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging27_20180328_122552
# 7985
Datast ID Fig6_Whole_brain_imaging27_20180328_122552
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging28_20180328_123003
# 7986
Datast ID Fig6_Whole_brain_imaging28_20180328_123003
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging29_20180328_123414
# 7987
Datast ID Fig6_Whole_brain_imaging29_20180328_123414
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging30_20180328_123829
# 7988
Datast ID Fig6_Whole_brain_imaging30_20180328_123829
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging31_20180328_124248
# 7989
Datast ID Fig6_Whole_brain_imaging31_20180328_124248
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging32_20180328_124658
# 7990
Datast ID Fig6_Whole_brain_imaging32_20180328_124658
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging33_20180328_125109
# 7991
Datast ID Fig6_Whole_brain_imaging33_20180328_125109
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6_Whole_brain_imaging34_20180328_125519
# 7992
Datast ID Fig6_Whole_brain_imaging34_20180328_125519
Dataset Kind Image data
Dataset Size 7.8 GB
4D view
SSBD:OMERO
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