SSBD
SSBD
:database
Share your data
SSBD:repository
SSBD:database
Resources
Resources in SSBD:database (metadata v3)
Resources in SSBD:database
Resources in SSBD:repository
Tools
Publications
About
About SSBD
Statistics
About us
News
Copyright
Usage
Key
Organism
Strain
Cell Line
Gene Symbol
Protein name
Protein tag
Reporter
Project ID
Dataset ID
Title
Description
Data Type
Gene Ontology
Biological Imaging Methods
Method Summary
Paper Information
Medical Subject Headlines
Person
Value
Search
Clear/View All
Detail of Figure6B_iRFP
SSBD:OMERO.gallery Dataset
SSBD:OMERO Dataset
SSBD:OMERO.gallery Project
SSBD:OMERO Project
4D View for Quantitative Data
Download Image Source
Download BDML Source
Download Workflow
SSBD:downloads
Project
77-Aoki-CellDynERK
SSBD:Repository
ssbd-repos-000077
Title
Time-lapse images of the H2B-iRFP in MDCK cells expresssing CRY2-CRaf, CIBN-EGFP-KRasCT, FLAG-MEK-mCFP, mCherry-ERK, and histone H2B-iRFP.
Description
NA
Release, Updated
2018-11-14,
2022-11-21
Errata in Project
2022/11/21 Corrected the organism to Canis lupus familiaris/MDCK cell from Mus musculus by author's request.
License
CC BY
Kind
Image data based on Experiment
File Formats
Data size
24.8 MB
Organism
Canis lupus familiaris
(
NCBI:txid9615
)
Strain(s)
-
Cell Line
MDCK cell (
CLO_0007646
)
Protein names
CRaf, KRasCT, MEK, ERK, H2B
Datatype
cell dynamics
Molecular Function (MF)
Biological Process (BP)
activation of MAP ERK kinase kinase (
GO:0000186
)
Cellular Component (CC)
-
Biological Imaging Method
XYZ Scale
XY: 1.48 micrometer/pixel, Z: NA
T scale
120 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
FluorescenceMicroscope
Acquisition mode
BrightField
Contrast method
Fluorescence
Microscope model
Olympus IX81
Detector model
Photometrics,Tucson,AZ
Objective model
UPlanSApo 20x/0.75 or UJPlanSApo 60x/1.42
Filter set
Summary of Methods
See details in Aoki et al. (2017) Dev Cell, 43(3): 305-317.
Related paper(s)
Contact
Kazuhiro Aoki , National Institutes of Natural Sciences , National Institute for Basic Biology , Division of Quantitative Biology
Contributors
Kazuhiro Aoki, Yohei Kondo, Honda Naoki, Toru Hiratsuka, Reina E. Itoh, Michiyuki Matsuda
OMERO Dataset
https://ssbd.riken.jp/omero/webclient/?show=dataset-851
OMERO Project
https://ssbd.riken.jp/omero/webclient/?show=project-155
Source
https://ssbd.riken.jp/data/77-Aoki-CellDynERK/source/Figure6B_iRFP.zip
(6.3 MB)