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Key
Organism
Strain
Cell Line
Gene Symbol
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Title
Description
Data Type
Gene Ontology
Biological Imaging Methods
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Detail of Fig5_retro-49
SSBD:OMERO.gallery Dataset
SSBD:OMERO Dataset
SSBD:OMERO.gallery Project
SSBD:OMERO Project
4D View for Quantitative Data
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Project
42-Hayashi-NeuronalCellDyn
SSBD:Repository
ssbd-repos-000042
Title
BDML file for the tracking of an endosome retrogradely transported in the axons of a supracervical ganglion (SCG) neurons in vitro
Description
NA
Release, Updated
2019-11-20
License
CC BY-NC-SA
Kind
Quantitative data based on Experiment
File Formats
Data size
882.2 KB
Organism
Rattus norvegicus
(
NCBI:txid10116
)
Strain(s)
-
Cell Line
-
Datatype
neuron cell dynamics
Molecular Function (MF)
Biological Process (BP)
axonal transport (
GO:0098930
)
Cellular Component (CC)
endosome (
GO:0005768
)
Biological Imaging Method
XYZ Scale
X: 1 micrometer, Y: NA, Z: NA
T scale
0.0102 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
FluorescenceMicroscope
Acquisition mode
WideField
Contrast method
Fluorescence
Microscope model
Olympus IX71
Detector model
Andor LucaS
Objective model
Olympus UPlanFL 100x/1.3
Filter set
Summary of Methods
See details in Hayashi et al. (2018) Mol Biol Cell, 29(25): 3017-3025
Related paper(s)
Contact
Yasushi Okada , RIKEN , Quantitative Biology Center , Laboratory for Cell Polarity Regulation
Contributors
Kumiko Hayashi, Yuta Tsuchizawa, Mitsuhiro Iwaki, Yasushi Okada
Local ID
Fig5_retro-49
BDML ID
ed4bad14-d594-4289-88fc-75f166d0784e
BDML/BD5
https://ssbd.riken.jp/data/42-Hayashi-NeuronalCellDyn/bdml/Fig5_retro-49_bdml3.0.zip
(36.1 KB)