Summary of 42-Hayashi-NeuronalCellDyn
SSBD:OMERO.gallery Project
SSBD:OMERO Project
SSBD:downloads
Title
BDML file for the tracking of an endosome retrogradely or anterogradely transported in the axon of a supracervical ganglion (SCG) neuron in vitro
Kind
Quantitative data
based on Experiment
Number of Datasets
198
( Image datasets: 0,
Quantitative data datasets: 198 )
Size of Datasets
87.2 MB
( Image datasets: 0 bytes,
Quantitative data datasets: 87.2 MB )
Organism(s)
Rattus norvegicus
Datatype
neuron cell dynamics
Biological Process (BP)
axonal transport
Cellular Component (CC)
endosome
Biological Imaging Method
-
XYZ Scale
X: 1 micrometer, Y: NA, Z: NA
T scale
0.0102 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
FluorescenceMicroscope
Acquisition mode
WideField
Contrast method
Fluorescence
Microscope model
Olympus IX71
Detector model
Andor LucaS
Objective model
Olympus UPlanFL 100x/1.3
Filter set
Olympus WIG filter set
Related paper(s)
Kumiko Hayashi, Yuta Tsuchizawa, Mitsuhiro Iwaki, Yasushi Okada (2018) Application of the fluctuation theorem for noninvasive force measurement in living neuronal axons., Molecular biology of the cell, Volume 29, Number 25, pp. 3017-3025
Published in 2018 Dec 1
(Electronic publication in Oct. 3, 2018, midnight )
(Abstract) Although its importance is recently widely accepted, force measurement has been difficult in living biological systems, mainly due to the lack of the versatile noninvasive force measurement methods. The fluctuation theorem, which represents the thermodynamic properties of small fluctuating nonequilibrium systems, has been applied to the analysis of the thermodynamic properties of motor proteins in vitro. Here we extend it to the axonal transport (displacement) of endosomes. The distribution of the displacement fluctuation had three or four distinct peaks around multiples of a unit value, which the fluctuation theorem can convert into the drag force exerted on the endosomes. The results demonstrated that a single cargo vesicle is conveyed by one to three or four units of force production.
(MeSH Terms)
Contact
Yasushi Okada
, RIKEN
, Quantitative Biology Center
, Laboratory for Cell Polarity Regulation
Contributors
Kumiko Hayashi, Yuta Tsuchizawa, Mitsuhiro Iwaki, Yasushi Okada
Dataset List of 42-Hayashi-NeuronalCellDyn
Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
1.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (50.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
2.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (105.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
347.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (15.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
509.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
488.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (20.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
474.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (20.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
836.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (34.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
507.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
1.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (62.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
530.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (22.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
630.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (26.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
493.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
756.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (31.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
438.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
347.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (15.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
255.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (12.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
459.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
333.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (15.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
630.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (26.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
611.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (26.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
834.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (34.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
683.5 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (28.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
590.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (25.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
443.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
350.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (15.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
385.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (17.3 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
879.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (36.0 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
824.5 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (34.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
276.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (12.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
493.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
505.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
486.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (20.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
403.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (17.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
459.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (19.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
495.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
564.2 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (23.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
367.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (16.5 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
573.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (24.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
646.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (27.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
576.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (24.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
699.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (28.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
613.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (25.9 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
573.8 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (24.2 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
542.9 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (23.1 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
509.7 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (21.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
533.3 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (22.7 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
486.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (20.8 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
576.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (24.4 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
267.6 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (12.6 KB)
Download Image data
zip
Thumbnail
-
Dataset Kind
Quantitative data
Dataset Size
946.4 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip (38.8 KB)
Download Image data
zip