Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset FigS3A
# 3529
Datast ID FigS3A
Dataset Kind Image data
Dataset Size 17.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3B_1
# 3530
Datast ID FigS3B_1
Dataset Kind Image data
Dataset Size 16.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3B_2
# 3531
Datast ID FigS3B_2
Dataset Kind Image data
Dataset Size 16.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3C_1
# 3532
Datast ID FigS3C_1
Dataset Kind Image data
Dataset Size 19.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3C_2
# 3533
Datast ID FigS3C_2
Dataset Kind Image data
Dataset Size 19.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3C_3
# 3534
Datast ID FigS3C_3
Dataset Kind Image data
Dataset Size 19.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3D
# 3535
Datast ID FigS3D
Dataset Kind Image data
Dataset Size 272.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3F
# 3536
Datast ID FigS3F
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS3G
# 3537
Datast ID FigS3G
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_1
# 3538
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_2
# 3539
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_3
# 3540
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_4
# 3541
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_5
# 3542
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_6
# 3543
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_7
# 3544
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_8
# 3545
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Acetophenone_9
# 3546
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_1
# 3547
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_2
# 3548
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_3
# 3549
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_4
# 3550
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_5
# 3551
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_6
# 3552
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_7
# 3553
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_8
# 3554
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Amylacetate_9
# 3555
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_1
# 3556
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_2
# 3557
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_3
# 3558
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_4
# 3559
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_5
# 3560
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_6
# 3561
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_7
# 3562
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_8
# 3563
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Anisol_9
# 3564
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_1
# 3565
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_2
# 3566
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_3
# 3567
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_4
# 3568
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_5
# 3569
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_6
# 3570
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_7
# 3571
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_8
# 3572
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Benzaldehyde_9
# 3573
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Beta-citronellol_1
# 3574
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Beta-citronellol_2
# 3575
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Beta-citronellol_3
# 3576
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Beta-citronellol_4
# 3577
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FiguS4A-S4B_Beta-citronellol_5
# 3578
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
Download BDML
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