Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_13
# 3479
Datast ID Fig8-S8_Oca_13
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_14
# 3480
Datast ID Fig8-S8_Oca_14
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_15
# 3481
Datast ID Fig8-S8_Oca_15
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_16
# 3482
Datast ID Fig8-S8_Oca_16
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_17
# 3483
Datast ID Fig8-S8_Oca_17
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_18
# 3484
Datast ID Fig8-S8_Oca_18
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_19
# 3485
Datast ID Fig8-S8_Oca_19
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_20
# 3486
Datast ID Fig8-S8_Oca_20
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_21
# 3487
Datast ID Fig8-S8_Oca_21
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_22
# 3488
Datast ID Fig8-S8_Oca_22
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_23
# 3489
Datast ID Fig8-S8_Oca_23
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_24
# 3490
Datast ID Fig8-S8_Oca_24
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_25
# 3491
Datast ID Fig8-S8_Oca_25
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_26
# 3492
Datast ID Fig8-S8_Oca_26
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_27
# 3493
Datast ID Fig8-S8_Oca_27
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_28
# 3494
Datast ID Fig8-S8_Oca_28
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_29
# 3495
Datast ID Fig8-S8_Oca_29
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_30
# 3496
Datast ID Fig8-S8_Oca_30
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_31
# 3497
Datast ID Fig8-S8_Oca_31
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_32
# 3498
Datast ID Fig8-S8_Oca_32
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_33
# 3499
Datast ID Fig8-S8_Oca_33
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_34
# 3500
Datast ID Fig8-S8_Oca_34
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_35
# 3501
Datast ID Fig8-S8_Oca_35
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_36
# 3502
Datast ID Fig8-S8_Oca_36
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_37
# 3503
Datast ID Fig8-S8_Oca_37
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_38
# 3504
Datast ID Fig8-S8_Oca_38
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_39
# 3505
Datast ID Fig8-S8_Oca_39
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Oca_40
# 3506
Datast ID Fig8-S8_Oca_40
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1D_1
# 3507
Datast ID FigS1D_1
Dataset Kind Image data
Dataset Size 2.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1D_2
# 3508
Datast ID FigS1D_2
Dataset Kind Image data
Dataset Size 2.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1D_3
# 3509
Datast ID FigS1D_3
Dataset Kind Image data
Dataset Size 2.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1D_4
# 3510
Datast ID FigS1D_4
Dataset Kind Image data
Dataset Size 163.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1E
# 3511
Datast ID FigS1E
Dataset Kind Image data
Dataset Size 144.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1F
# 3512
Datast ID FigS1F
Dataset Kind Image data
Dataset Size 918.9 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1I
# 3513
Datast ID FigS1I
Dataset Kind Image data
Dataset Size 17.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1J
# 3514
Datast ID FigS1J
Dataset Kind Image data
Dataset Size 133.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1K_1
# 3515
Datast ID FigS1K_1
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1K_2
# 3516
Datast ID FigS1K_2
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1K_3
# 3517
Datast ID FigS1K_3
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1L_1
# 3518
Datast ID FigS1L_1
Dataset Kind Image data
Dataset Size 2.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1L_2
# 3519
Datast ID FigS1L_2
Dataset Kind Image data
Dataset Size 2.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1L_3
# 3520
Datast ID FigS1L_3
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1M_1
# 3521
Datast ID FigS1M_1
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1M_2
# 3522
Datast ID FigS1M_2
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1M_3
# 3523
Datast ID FigS1M_3
Dataset Kind Image data
Dataset Size 2.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS1N
# 3524
Datast ID FigS1N
Dataset Kind Image data
Dataset Size 4.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS2A
# 3525
Datast ID FigS2A
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS2B
# 3526
Datast ID FigS2B
Dataset Kind Image data
Dataset Size 40.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS2C
# 3527
Datast ID FigS2C
Dataset Kind Image data
Dataset Size 37.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset FigS2D
# 3528
Datast ID FigS2D
Dataset Kind Image data
Dataset Size 32.5 MB
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SSBD:OMERO
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