SSBD - SSBD:database - 47-Noguchi-CellDyn

Summary of 47-Noguchi-CellDyn

SSBD:database

47-Noguchi-CellDyn

SSBD:database URL

https://ssbd.riken.jp/database/47-Noguchi-CellDyn/

SSBD:repository

ssbd-repos-000047

SSBD:repository URL

https://ssbd.riken.jp/repository/47/

Title

Description

Release date

2018-11-14

Updated date

License

CC BY

Kind

Image data based on Experiment

Number of Datasets

38 ( Image datasets: 38, Quantitative data datasets: 0 )

Size of Datasets

90.2 GB ( Image datasets: 90.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)

Mus musculus

Gene symbol(s)

Ascl1, Ret

Protein name(s)

CXCR4, H2B, Laminin, N-cadherin, PGP9.5, RET

Protein tag(s)

EGFP, mCherry

Reporter(s)

DAPI

Datatype

cell dynamics

Molecular Function (MF)

Biological Process (BP)

Cellular Component (CC)

Biological Imaging Method

XYZ Scale

XY: 0.196 micrometer/pixel, Z: NA, XY: 1.656 micrometer/pixel, Z: 17.179 micrometer/pixel, XY: 0.489 micrometer/pixel, Z: 3.0 micrometer/pixel, XY: 0.664 micrometer/pixel, Z: 2.5 micrometer/pixel, XY: 0.828 micrometer/pixel, Z: 7.0 micrometer/pixel, XY: 0.636 micrometer/pixel, Z: 7.0 micrometer/pixel, NA, XY: 0.415 micrometer/pixel, Z: NA, XY: 0.461 micrometer/pixel, Z: NA, XY: 1.325 micrometer/pixel, Z: 6.0 micrometer/pixel, XY: 0.636 micrometer/pixel, Z: 6.0 micrometer/pixel, XY: 1.136 micrometer/pixel, Z: 6.5 micrometer/pixel, XY: 0.830 micrometer/pixel, Z: NA, XY: 0.496 micrometer/pixel, Z: 2.5 micrometer/pixel, XY: 0.033 micrometer/pixel, Z: 0.375 micrometer/pixel, XY: 1.656 micrometer/pixel, Z: 11.9 micrometer/pixel, XY: 0.828 micrometer/pixel, Z: 6.0 micrometer/pixel, XY: 0.414 micrometer/pixel, Z: 2.5 micrometer/pixel, XY: 1.325 micrometer/pixel, Z: 6.5 micrometer/pixel, XY: 0.132 micrometer/pixel, Z: NA

T scale

NA, 30 minute

Image Acquisition

Experiment type

Immunofluorescence, Immunocytochemistry

Microscope type

ConfocalMicroscope

Acquisition mode

LaserScanningConfocalMicroscopy

Contrast method

Fluorescence

Microscope model

Carl Zeiss LSM710, NA, Olympus FV1200MPE, Olympus FV1200MPE-IX83

Detector model

PMT, NA

Objective model

Olympus XLPLN25XWMP 25x/1.05, Olympus XLPLN25XSVMP 25x/0.8, Plan-Apochromat 63x/1.40 Oil DIC M27, Plan-Apochromat 20x/0.8, Carl Zeiss Plan-Apochromat 20x/0.8 M27, Carl Zeiss LD LCI Plan-Apochromat 63x/1.4 Oil DIC M27, Olympus XLPLN25XSVMP 25x/0.9, Carl Zeiss LD LCI Plan-Apochromat 25x/0.8 Imm Korr DIC M27, NA

Filter set

Dataset List of 47-Noguchi-CellDyn

Thumbnail

Dataset ID

Kind

Size

4D View

SSBD:OMERO

Download BDML

Download Images

Thumbnail

# 1241

Datast ID Fig1A

Dataset Kind Image data

Dataset Size 12.8 MB

4D view

SSBD:OMERO

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Thumbnail

# 1242

Datast ID Fig1B

Dataset Kind Image data

Dataset Size 8.5 MB

4D view

SSBD:OMERO

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Thumbnail

# 1243

Datast ID Fig1D

Dataset Kind Image data

Dataset Size 757.5 MB

4D view

SSBD:OMERO

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Thumbnail

# 1244

Datast ID Fig1E

Dataset Kind Image data

Dataset Size 757.5 MB

4D view

SSBD:OMERO

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Thumbnail

# 1245

Datast ID Fig1F

Dataset Kind Image data

Dataset Size 741.5 MB

4D view

SSBD:OMERO

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Thumbnail

# 1246

Datast ID Fig2A

Dataset Kind Image data

Dataset Size 63.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1247

Datast ID Fig2B

Dataset Kind Image data

Dataset Size 22.7 MB

4D view

SSBD:OMERO

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Thumbnail

# 1248

Datast ID Fig2E

Dataset Kind Image data

Dataset Size 1.9 GB

4D view

SSBD:OMERO

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Thumbnail

# 1249

Datast ID Fig3A

Dataset Kind Image data

Dataset Size 686.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1250

Datast ID Fig3C

Dataset Kind Image data

Dataset Size 6.3 GB

4D view

SSBD:OMERO

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Thumbnail

# 1251

Datast ID Fig3E

Dataset Kind Image data

Dataset Size 5.4 GB

4D view

SSBD:OMERO

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Thumbnail

# 1252

Datast ID Fig3G

Dataset Kind Image data

Dataset Size 2.4 GB

4D view

SSBD:OMERO

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Thumbnail

# 1253

Datast ID Fig3H

Dataset Kind Image data

Dataset Size 88.1 MB

4D view

SSBD:OMERO

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Thumbnail

# 1254

Datast ID Fig4B

Dataset Kind Image data

Dataset Size 15.5 GB

4D view

SSBD:OMERO

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Thumbnail

# 1255

Datast ID Fig4C

Dataset Kind Image data

Dataset Size 1.7 GB

4D view

SSBD:OMERO

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Thumbnail

# 1256

Datast ID Fig4D

Dataset Kind Image data

Dataset Size 1.5 GB

4D view

SSBD:OMERO

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Thumbnail

# 1257

Datast ID Fig4F

Dataset Kind Image data

Dataset Size 45.2 MB

4D view

SSBD:OMERO

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Thumbnail

# 1258

Datast ID Fig4G

Dataset Kind Image data

Dataset Size 6.2 MB

4D view

SSBD:OMERO

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Thumbnail

# 1259

Datast ID FigS1B-1

Dataset Kind Image data

Dataset Size 8.5 MB

4D view

SSBD:OMERO

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Thumbnail

# 1260

Datast ID FigS1B-2

Dataset Kind Image data

Dataset Size 262.1 MB

4D view

SSBD:OMERO

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Thumbnail

# 1261

Datast ID FigS1B-3

Dataset Kind Image data

Dataset Size 264.1 MB

4D view

SSBD:OMERO

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Thumbnail

# 1262

Datast ID FigS1D

Dataset Kind Image data

Dataset Size 50.1 MB

4D view

SSBD:OMERO

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Thumbnail

# 1263

Datast ID FigS1G-E14.5-2

Dataset Kind Image data

Dataset Size 916.7 MB

4D view

SSBD:OMERO

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Thumbnail

# 1264

Datast ID FigS1G-E14.5-3

Dataset Kind Image data

Dataset Size 194.1 MB

4D view

SSBD:OMERO

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Thumbnail

# 1265

Datast ID FigS1G-E15.5-2

Dataset Kind Image data

Dataset Size 2.5 GB

4D view

SSBD:OMERO

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Thumbnail

# 1266

Datast ID FigS1G-E15.5-3

Dataset Kind Image data

Dataset Size 153.6 MB

4D view

SSBD:OMERO

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Thumbnail

# 1267

Datast ID FigS1G-E16.5-2

Dataset Kind Image data

Dataset Size 4.2 GB

4D view

SSBD:OMERO

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Thumbnail

# 1268

Datast ID FigS1G-E16.5-3

Dataset Kind Image data

Dataset Size 7.4 GB

4D view

SSBD:OMERO

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Thumbnail

# 1269

Datast ID FigS3-E14.5-2

Dataset Kind Image data

Dataset Size 5.0 GB

4D view

SSBD:OMERO

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Thumbnail

# 1270

Datast ID FigS3-E14.5-3

Dataset Kind Image data

Dataset Size 13.6 GB

4D view

SSBD:OMERO

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Thumbnail

# 1271

Datast ID FigS3-E15.5-2

Dataset Kind Image data

Dataset Size 1.8 GB

4D view

SSBD:OMERO

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Thumbnail

# 1272

Datast ID FigS3-E15.5-3

Dataset Kind Image data

Dataset Size 6.3 GB

4D view

SSBD:OMERO

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Thumbnail

# 1273

Datast ID FigS3-E16.5-2

Dataset Kind Image data

Dataset Size 3.6 GB

4D view

SSBD:OMERO

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Thumbnail

# 1274

Datast ID FigS3-E16.5-3-1

Dataset Kind Image data

Dataset Size 2.7 GB

4D view

SSBD:OMERO

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Thumbnail

# 1275

Datast ID FigS3-E16.5-3-2

Dataset Kind Image data

Dataset Size 3.2 GB

4D view

SSBD:OMERO

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Thumbnail

# 1276

Datast ID FigS4-E14.5

Dataset Kind Image data

Dataset Size 6.2 MB

4D view

SSBD:OMERO

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Thumbnail

# 1277

Datast ID FigS4-E18.5

Dataset Kind Image data

Dataset Size 50.3 MB

4D view

SSBD:OMERO

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Thumbnail

# 1278

Datast ID FigS4-E15.5

Dataset Kind Image data

Dataset Size 6.1 MB

4D view

SSBD:OMERO

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