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Resources in SSBD:database
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SSBD:OMERO
SSBD:BFF
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Key
Organism
Strain
Cell Line
Gene Symbol
Protein name
Protein tag
Reporter
Project ID
Dataset ID
Title
Description
Data Type
Gene Ontology
Biological Imaging Methods
Method Summary
Paper Information
Medical Subject Headlines
Person
Value
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Summary of 30-Inomata-CellDyn
SSBD:OMERO.gallery Project
SSBD:OMERO Project
SSBD:downloads
SSBD:database
30-Inomata-CellDyn
SSBD:database URL
https://ssbd.riken.jp/database/30-Inomata-CellDyn/
SSBD:repository
ssbd-repos-000030
SSBD:repository URL
https://ssbd.riken.jp/repository/30/
Title
-
Description
-
Release date
2017-10-03
Updated date
2018-11-15
License
CC BY-NC-SA
Kind
Image data based on Experiment
Number of Datasets
5 ( Image datasets: 5, Quantitative data datasets: 0 )
Size of Datasets
1.2 GB ( Image datasets: 1.2 GB, Quantitative data datasets: 0 bytes )
Organism(s)
Xenopus laevis
Protein name(s)
Chordin, Noggin, Sizzled, TM
Protein tag(s)
mEGFP
Datatype
cell dynamics
Molecular Function (MF)
Biological Process (BP)
NA (protein diffusion)
Cellular Component (CC)
-
Biological Imaging Method
-
XYZ Scale
XY: 0.267 micrometer/pixel, Z: 0 micrometer/frame
T scale
0.97 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Carl Zeiss LSM710
Detector model
-
Objective model
Carl Zeiss Plan-Apochromat 20x/0.8
Filter set
-
Related paper(s)
Contact
Hidehiko Inomata , RIKEN , Center for Developmental Biology , Laboratory for Physical Biology
Contributors
Hidehiko Inomata, Tatsuo Shibata, Tomoko Haraguchi, Yoshiki Sasai
Dataset List of 30-Inomata-CellDyn
Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
1
Thumbnail
#
966
Datast ID
MovieS3-EG-Chd
Dataset Kind
Image data
Dataset Size
290.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (285.7 MB)
Thumbnail
#
967
Datast ID
MovieS4-EG-Nog
Dataset Kind
Image data
Dataset Size
232.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (229.8 MB)
Thumbnail
#
968
Datast ID
MovieS5-EG-Szl
Dataset Kind
Image data
Dataset Size
270.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (266.8 MB)
Thumbnail
#
969
Datast ID
MovieS2-EG-TM
Dataset Kind
Image data
Dataset Size
141.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (139.9 MB)
Thumbnail
#
970
Datast ID
MovieS1-EG
Dataset Kind
Image data
Dataset Size
292.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (287.6 MB)
1