Summary of 218-Tanaka-CellSignallingDyn

SSBD:database
SSBD:database URL
Title
Live imaging of different cells response to IFN-γ both in vivo and in vitro and BDML file for quantitative information of tumor size in B6 albino mice implanted with different cells.
Description
-
Relase date
2022-11-23
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
32 ( Image datasets: 32, Quantitative data datasets: 0 )
Size of Datasets
5.6 GB ( Image datasets: 5.6 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Strain(s)
C57BL/6 (mouse)
Cell lines(s)
BrafV600E cell, Panc02 cel, MC-38 cell , B16F10 melanoma cell
Gene symbol(s)
Gnaq, Ifngr1

Datatype
-
Molecular Function (MF)
IFN binding, interferon-gamma binding
Biological Process (BP)
Cellular Component (CC)
Biological Imaging Method
time lapse microscopy, fluorescence microscopy, two-photon excitation microscopy
X scale
0.414 micrometer/pixel, 0.64 micrometer/pixel, 500 micrometer/pixel
Y scale
0.414 micrometer/pixel, 0.64 micrometer/pixel, 500 micrometer/pixel
Z scale
10 micrometer/slice, NA
T scale
30 sec interval in each file. 1 day per time interval., NA, 2 hours per time interval

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Taisei Tanaka, Yoshinobu Konishi, Hiroshi Ichise, Shinya Tsukiji, Michiyuki Matsuda, Kenta Terai (2021) A Dual Promoter System to Monitor IFN-gamma Signaling in vivo at Single-cell Resolution., Cell structure and function, Volume 46, Number 2, pp. 103-111

Published in 2021 Dec 22 (Electronic publication in Nov. 6, 2021, midnight )

(Abstract) IFN-gamma secreted from immune cells exerts pleiotropic effects on tumor cells, including induction of immune checkpoint and antigen presentation, growth inhibition, and apoptosis induction. We combined a dual promoter system with an IFN-gamma signaling responsive promoter to generate a reporter named the interferon sensing probe (ISP), which quantitates the response to IFN-gamma by means of fluorescence and bioluminescence. The integration site effect of the transgene is compensated for by the PGK promoter-driven expression of a fluorescent protein. Among five potential IFN-gamma-responsive elements, we found that the interferon gamma-activated sequence (GAS) exhibited the best performance. When ISP-GAS was introduced into four cell lines and subjected to IFN-gamma stimulation, dose-dependency was observed with an EC50 ranging from 0.2 to 0.9 ng/mL, indicating that ISP-GAS can be generally used as a sensitive biosensor of IFN-gamma response. In a syngeneic transplantation model, the ISP-GAS-expressing cancer cells exhibited bioluminescence and fluorescence signals in an IFN-gamma receptor-dependent manner. Thus, ISP-GAS could be used to quantitatively monitor the IFN-gamma response both in vitro and in vivo.Key words: in vivo imaging, tumor microenvironment, interferon-gamma, dual promoter system.
(MeSH Terms)

Contact
Kenta Terai , kyoto University , Graduate School of Medicine , Department of Pathology and Biology of Diseases
Contributors
Kenta Terai, Taisei Tanaka


Dataset List of 218-Tanaka-CellSignallingDyn

#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
# 7741
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7742
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7743
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7744
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7745
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7746
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7747
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7748
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7749
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7750
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7751
Dataset Kind Image data
Dataset Size 464.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7752
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7753
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7754
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7755
Dataset Kind Image data
Dataset Size 448.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7756
Dataset Kind Image data
Dataset Size 49.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7757
Dataset Kind Image data
Dataset Size 142.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7758
Dataset Kind Image data
Dataset Size 184.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7759
Dataset Kind Image data
Dataset Size 107.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7760
Dataset Kind Image data
Dataset Size 132.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7761
Dataset Kind Image data
Dataset Size 132.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7762
Dataset Kind Image data
Dataset Size 111.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7763
Dataset Kind Image data
Dataset Size 97.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7764
Dataset Kind Image data
Dataset Size 104.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7765
Dataset Kind Image data
Dataset Size 99.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7766
Dataset Kind Image data
Dataset Size 100.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7767
Dataset Kind Image data
Dataset Size 87.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7768
Dataset Kind Image data
Dataset Size 96.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7769
Dataset Kind Image data
Dataset Size 56.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7770
Dataset Kind Image data
Dataset Size 87.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7771
Dataset Kind Image data
Dataset Size 78.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 7772
Dataset Kind Image data
Dataset Size 66.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data