Summary of 177-Kinjo-cAMPsignalingDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Fluorescence images of the cAMP-Signaling Pathway in 3D Tissues with FRET-Assisted Two-Photon Activation of bPAC.
Description
-
Release date
2022-03-31
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
112 ( Image datasets: 112, Quantitative data datasets: 0 )
Size of Datasets
4.3 GB ( Image datasets: 4.3 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Homo sapiens, Canis lupus familiaris, Mus musculus
Cell lines(s)
MDCK cell, HeLa cell
Protein name(s)
TFP1

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
cAMP-mediated signaling
Cellular Component (CC)
cAMP-dependent protein kinase complex
Biological Imaging Method
FRET, differences in fluorescence lifetime, time lapse microscopy
X scale
0.662 micrometer/pixel, 0.828 micrometer/pixel, 0.497 micrometer/pixel, 0.795 micrometer/pixel, NA
Y scale
0.662 micrometer/pixel, 0.828 micrometer/pixel, 0.497 micrometer/pixel, 0.795 micrometer/pixel, NA
Z scale
1 micrometer/pixel, NA, 2 micrometer/pixel
T scale
10.03 sec per time interval, 305 sec per time interval, 20 sec per time interval, 30 sec per time interval, 10.07 sec per time interval, 10.06 sec per time interval, 10.08 sec per time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Tomoaki Kinjo, Tetsuya Watabe, Kenju Kobachi, Kenta Terai, Michiyuki Matsuda (2020) Single-Cell Activation of the cAMP-Signaling Pathway in 3D Tissues with FRET-Assisted Two-Photon Activation of bPAC., ACS chemical biology, Volume 15, Number 11, pp. 2848-2853

Published in 2020 Nov 20 (Electronic publication in Oct. 19, 2020, midnight )

(Abstract) Bacterial photoactivated adenylyl cyclase (bPAC) has been widely used in signal transduction research. However, due to its low two-photon absorption, bPAC cannot be efficiently activated by two-photon (2P) excitation. Taking advantage of the high two-photon absorption of monomeric teal fluorescent protein 1 (mTFP1), we herein developed 2P-activatable bPAC (2pabPAC), a fusion protein consisting of bPAC and mTFP1. In 2pabPAC, the energy absorbed by mTFP1 excites bPAC by Furster resonance energy transfer (FRET) at ca. 43% efficiency. The light-induced increase in cAMP was monitored by a red-shifted FRET biosensor for PKA. In 3D MDCK cells and mouse liver, PKA was activated at single-cell resolution under a 2P microscope. We found that PKA activation in a single hepatocyte caused PKA activation in neighboring cells, indicating the propagation of PKA activation. Thus, 2pabPAC will provide a versatile platform for controlling the cAMP signaling pathway and investigating cell-to-cell communication in vivo.
(MeSH Terms)

Contact
Kenta Terai , Graduate School of Medicine, Kyoto University , Department of Pathology and Biology of Diseases
Contributors

Dataset List of 177-Kinjo-cAMPsignalingDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714-2nd_1st_z41_pre
# 6950
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200717_1st_z41_2P
# 6951
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200717_1st_z41_postHgL
# 6952
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200717_1st_z41_pre
# 6953
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200717_2nd_z41_2P
# 6954
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200717_2nd_z41_postHgL
# 6955
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200717_2nd_z41_pre
# 6956
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4BC_2pabPAC_20200127_5th_good_post2P-1st
# 6957
Dataset Kind Image data
Dataset Size 52.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4BC_2pabPAC_20200127_5th_good_post2P-2nd
# 6958
Dataset Kind Image data
Dataset Size 52.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4BC_2pabPAC_20200127_5th_good_post2P-3rd
# 6959
Dataset Kind Image data
Dataset Size 52.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4BC_2pabPAC_20200127_5th_good_postHgL
# 6960
Dataset Kind Image data
Dataset Size 52.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4BC_2pabPAC_20200127_5th_good_pre
# 6961
Dataset Kind Image data
Dataset Size 52.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data