Summary of 177-Kinjo-cAMPsignalingDyn


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Title
Fluorescence images of the cAMP-Signaling Pathway in 3D Tissues with FRET-Assisted Two-Photon Activation of bPAC.
Description
-
Release date
2022-03-31
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
112 ( Image datasets: 112, Quantitative data datasets: 0 )
Size of Datasets
4.3 GB ( Image datasets: 4.3 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Homo sapiens, Canis lupus familiaris, Mus musculus
Cell lines(s)
MDCK cell, HeLa cell
Protein name(s)
TFP1

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
cAMP-mediated signaling
Cellular Component (CC)
cAMP-dependent protein kinase complex
Biological Imaging Method
FRET, differences in fluorescence lifetime, time lapse microscopy
X scale
0.662 micrometer/pixel, 0.828 micrometer/pixel, 0.497 micrometer/pixel, 0.795 micrometer/pixel, NA
Y scale
0.662 micrometer/pixel, 0.828 micrometer/pixel, 0.497 micrometer/pixel, 0.795 micrometer/pixel, NA
Z scale
1 micrometer/pixel, NA, 2 micrometer/pixel
T scale
10.03 sec per time interval, 305 sec per time interval, 20 sec per time interval, 30 sec per time interval, 10.07 sec per time interval, 10.06 sec per time interval, 10.08 sec per time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Tomoaki Kinjo, Tetsuya Watabe, Kenju Kobachi, Kenta Terai, Michiyuki Matsuda (2020) Single-Cell Activation of the cAMP-Signaling Pathway in 3D Tissues with FRET-Assisted Two-Photon Activation of bPAC., ACS chemical biology, Volume 15, Number 11, pp. 2848-2853

Published in 2020 Nov 20 (Electronic publication in Oct. 19, 2020, midnight )

(Abstract) Bacterial photoactivated adenylyl cyclase (bPAC) has been widely used in signal transduction research. However, due to its low two-photon absorption, bPAC cannot be efficiently activated by two-photon (2P) excitation. Taking advantage of the high two-photon absorption of monomeric teal fluorescent protein 1 (mTFP1), we herein developed 2P-activatable bPAC (2pabPAC), a fusion protein consisting of bPAC and mTFP1. In 2pabPAC, the energy absorbed by mTFP1 excites bPAC by Furster resonance energy transfer (FRET) at ca. 43% efficiency. The light-induced increase in cAMP was monitored by a red-shifted FRET biosensor for PKA. In 3D MDCK cells and mouse liver, PKA was activated at single-cell resolution under a 2P microscope. We found that PKA activation in a single hepatocyte caused PKA activation in neighboring cells, indicating the propagation of PKA activation. Thus, 2pabPAC will provide a versatile platform for controlling the cAMP signaling pathway and investigating cell-to-cell communication in vivo.
(MeSH Terms)

Contact
Kenta Terai , Graduate School of Medicine, Kyoto University , Department of Pathology and Biology of Diseases
Contributors

Dataset List of 177-Kinjo-cAMPsignalingDyn

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Figure3C_20200715_4493NES_2nd3cells_2P
# 6900
Dataset Kind Image data
Dataset Size 61.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200715_4493NES_2nd3cells_post_handBL
# 6901
Dataset Kind Image data
Dataset Size 31.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200715_4493NES_2nd3cells_pre
# 6902
Dataset Kind Image data
Dataset Size 15.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_2pabPAC_1st3cells_2P
# 6903
Dataset Kind Image data
Dataset Size 61.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_2pabPAC_1st3cells_post_handBL
# 6904
Dataset Kind Image data
Dataset Size 31.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_2pabPAC_1st3cells_pre
# 6905
Dataset Kind Image data
Dataset Size 15.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_2pabPAC_2nd3cells_2P
# 6906
Dataset Kind Image data
Dataset Size 61.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_2pabPAC_2nd3cells_post_handBL
# 6907
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_2pabPAC_2nd3cells_pre
# 6908
Dataset Kind Image data
Dataset Size 15.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_4493NES_1st3cells_2P
# 6909
Dataset Kind Image data
Dataset Size 61.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_4493NES_1st3cells_post_handBL
# 6910
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_4493NES_1st3cells_pre
# 6911
Dataset Kind Image data
Dataset Size 15.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_4493NES_2nd_2P
# 6912
Dataset Kind Image data
Dataset Size 61.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_4493NES_2nd_post_handBL
# 6913
Dataset Kind Image data
Dataset Size 31.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3C_20200717_4493NES_2nd_pre
# 6914
Dataset Kind Image data
Dataset Size 15.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3D_20200118_RMDCK_2pabPAC_2P
# 6915
Dataset Kind Image data
Dataset Size 21.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3D_20200118_RMDCK_2pabPAC_post_handBL
# 6916
Dataset Kind Image data
Dataset Size 21.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3D_20200118_RMDCK_2pabPAC_pre
# 6917
Dataset Kind Image data
Dataset Size 21.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200127_1st_z41_2P
# 6918
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200127_1st_z41_postHgL
# 6919
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200127_1st_z41_pre
# 6920
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200716_1st_z41_2P
# 6921
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200716_1st_z41_postHgL
# 6922
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200716_1st_z41_pre
# 6923
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200716-2nd_1st_z41_female_2P
# 6924
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200716-2nd_1st_z41_female_postHgL
# 6925
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200716-2nd_1st_z41_female_pre
# 6926
Dataset Kind Image data
Dataset Size 44.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200717-2nd_1st_z41_male_2P
# 6927
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200717-2nd_1st_z41_male_postHgL
# 6928
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200717-2nd_1st_z41_male_pre
# 6929
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200717-2nd_2nd_z41_male_2P
# 6930
Dataset Kind Image data
Dataset Size 66.3 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200717-2nd_2nd_z41_male_postHgL
# 6931
Dataset Kind Image data
Dataset Size 66.3 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_20200717-2nd_2nd_z41_male_pre
# 6932
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_without_20200322_1st_z41_2P
# 6933
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_without_20200322_1st_z41_postHgL
# 6934
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_without_20200322_1st_z41_pre
# 6935
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_1st_z41_2P
# 6936
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_1st_z41_postHgL
# 6937
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_1st_z41_pre
# 6938
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_2nd_z41_2P
# 6939
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_2nd_z41_postHgL
# 6940
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_2nd_z41_pre
# 6941
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_3rd_z41_2P
# 6942
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_3rd_z41_postHgL
# 6943
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_3rd_z41_pre
# 6944
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_4th_z41_2P
# 6945
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_4th_z41_postHgL
# 6946
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714_4th_z41_pre
# 6947
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714-2nd_1st_z41_2P
# 6948
Dataset Kind Image data
Dataset Size 66.3 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_2pabPAC_Y72L_20200714-2nd_1st_z41_postHgL
# 6949
Dataset Kind Image data
Dataset Size 44.2 MB
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SSBD:OMERO
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