SSBD - SSBD:database - Project list

Projects

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Project

Release, Updated

# of images

# of quantitative data

Organism(s)

Datatype

Paper information

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Project 77-Aoki-CellDynERK
SSBD:repository:
ssbd-repos-000077

Release, Updated 2018-11-14,
2022-11-21 (errata)

# of image datasets 14
size of image datasets 1.4 GB

# of quantitative datasets 2
size of quantitative datasets 548.1 KB

Organism(s) Canis lupus familiaris

DataType(s) cell dynamics

Paper information Aoki K et. al. (2017), Dev Cell 43(3), 305-317.e5
doi: 10.1016/j.devcel.2017.10.016
pmid: 29112851

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Project 78-Takagi-CellDyn
SSBD:repository:
ssbd-repos-000078

Release, Updated 2018-11-14

# of image datasets 8
size of image datasets 6.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell dynamics

Paper information Takagi S et. al. (2017), Clin Ophthalmol 11, 1219-1225
doi: 10.2147/OPTH.S134338
pmid: 28721006

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Project 79-Inomata-HeLaCell
SSBD:repository:
ssbd-repos-000079

Release, Updated 2018-11-14

# of image datasets 8
size of image datasets 6.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) intracellular structure

Paper information Inomata K et. al. (2017), Chem Commun (Camb) 53(81), 11245-11248
doi: 10.1039/c7cc06004a
pmid: 28960222

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Project 81-Yasugi-DmeCellDyn
SSBD:repository:
ssbd-repos-000081

Release, Updated 2018-11-14

# of image datasets 4
size of image datasets 4.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila melanogaster

DataType(s) LysoTracker-positive vesicle, nucleus

Paper information Yasugi T et. al. (2017), Sci Rep 7(1), 1619
doi: 10.1038/s41598-017-01754-9
pmid: 28487555

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Project 82-Ikeda-GeneExp
SSBD:repository:
ssbd-repos-000082

Release, Updated 2018-11-14

# of image datasets 9
size of image datasets 50.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) gene expression

Paper information Ikeda T et. al. (2018), Nat Commun 9(1), 1387
doi: 10.1038/s41467-018-03748-1
pmid: 29643333

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Project 83-Fumoto-LungDevWnt
SSBD:repository:
ssbd-repos-000083

Release, Updated 2018-11-14

# of image datasets 18
size of image datasets 31.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) organ formation

Paper information Fumoto K et. al. (2017), Development 144(1), 151-162
doi: 10.1242/dev.141325
pmid: 27913639

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Project 84-Ito-CellDyn
SSBD:repository:
ssbd-repos-000084

Release, Updated 2018-11-14

# of image datasets 7
size of image datasets 638.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell dynamics

Paper information Ito S et. al. (2017), Nat Commun 8(1), 1834
doi: 10.1038/s41467-017-01945-y
pmid: 29184140

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Project 85-Kosodo-NeuralballDyn
SSBD:repository:
ssbd-repos-000085

Release, Updated 2018-11-14

# of image datasets 3
size of image datasets 1.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Dynamics of neural ball shape and neural differentiation

Paper information Kosodo Y et. al. (2017), Biochem Biophys Res Commun 483(1), 94-100
doi: 10.1016/j.bbrc.2016.12.187
pmid: 28063930

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Project 87-CorneliaKoeverle-SpineDyn
SSBD:repository:
ssbd-repos-000087

Release, Updated 2018-11-14

# of image datasets 30
size of image datasets 204.9 MB

# of quantitative datasets 2
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) spine dynamics

Paper information Cornelia Koeberle S et. al. (2017), Sci Rep 7(1), 13409
doi: 10.1038/s41598-017-13728-y
pmid: 29042611

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Project 89-Isshiki-SpineDyn
SSBD:repository:
ssbd-repos-000089

Release, Updated 2018-11-14

# of image datasets 40
size of image datasets 2.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) spine dynamics

Paper information Isshiki M et. al. (2014), Nat Commun 5, 4742
doi: 10.1038/ncomms5742
pmid: 25144834

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Project 90-Ishiwata-SpindleDyn
SSBD:repository:
ssbd-repos-000090

Release, Updated 2018-11-14

# of image datasets 3
size of image datasets 524.8 KB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Xenopus laevis, Homo sapiens

DataType(s) spindle dynamics

Paper information Ishiwata, Shin'ichi et. al. (2017), Molecular Crystals and Liquid Crystals 647(1), 127-150
doi: 10.1080/15421406.2017.1289445

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Project 91-Konagaya-AMPKactivity
SSBD:repository:
ssbd-repos-000091

Release, Updated 2018-11-14

# of image datasets 6
size of image datasets 1.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) Cell dynamic

Paper information Konagaya Y et. al. (2017), Cell Rep 21(9), 2628-2638
doi: 10.1016/j.celrep.2017.10.113
pmid: 29186696

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Project 92-Uda-CellsigDyn
SSBD:repository:
ssbd-repos-000092

Release, Updated 2018-11-14

# of image datasets 21
size of image datasets 1.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell signaling dynamics

Paper information Uda Y et. al. (2017), Proc Natl Acad Sci U S A 114(45), 11962-11967
doi: 10.1073/pnas.1707190114
pmid: 29078307

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Project 95-Nojima-CellMorphology
SSBD:repository:
ssbd-repos-000095

Release, Updated 2018-11-14

# of image datasets 114
size of image datasets 608.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) cell morphology

Paper information Nojima S et. al. (2017), Sci Rep 7(1), 9269
doi: 10.1038/s41598-017-09117-0
pmid: 28839164

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Project 96-Kamimura-ChemotaxisDyn
SSBD:repository:
ssbd-repos-000096

Release, Updated 2018-11-14

# of image datasets 5
size of image datasets 1.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Dictyostelium discoideum AX2

DataType(s) dynamic of eukaryotic chemotaxis

Paper information Kamimura Y et. al. (2016), Proc Natl Acad Sci U S A 113(16), 4356-61
doi: 10.1073/pnas.1516767113
pmid: 27044073

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Project 106-Jin-BreastTumorFlu
SSBD:repository:
ssbd-repos-000106

Release, Updated 2018-11-14

# of image datasets 8
size of image datasets 4.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) breast tumor fluorescence

Paper information Jin, Takashi et. al. (2016), Med. Chem. Commun. 7(4), 623-631
doi: 10.1039/C5MD00580A

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Project 107-Tsuboi-BreastTumorFlu
SSBD:repository:
ssbd-repos-000107

Release, Updated 2018-11-14

# of image datasets 13
size of image datasets 11.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) breast tumor fluorescence

Paper information Tsuboi S et. al. (2017), Chem Commun (Camb) 53(68), 9450-9453
doi: 10.1039/c7cc04966h
pmid: 28795717

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Project 110-Makino-MembraneDyn
SSBD:repository:
ssbd-repos-000110

Release, Updated 2018-11-14

# of image datasets 10
size of image datasets 60.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) membrane nakanori distribution

Paper information Makino A et. al. (2017), FASEB J 31(4), 1301-1322
doi: 10.1096/fj.201500075R
pmid: 27492925

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Project 21-Yasui-MolDynPTEN
SSBD:repository:
ssbd-repos-000021

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 13
size of image datasets 1.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Dictyostelium discoideum

DataType(s) single molecule dynamics

Paper information Yasui M et. al. (2014), PLoS Comput Biol 10(9), e1003817
doi: 10.1371/journal.pcbi.1003817
pmid: 25211206

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Project 22-Kondo-CellDyn
SSBD:repository:
ssbd-repos-000022

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 16
size of image datasets 50.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila melanogaster

DataType(s) cell dynamics

Paper information Kondo T and Hayashi S (2013), Nature 494(7435), 125-9
doi: 10.1038/nature11792
pmid: 23334416

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Project 23-Shirai-ESCellTissue
SSBD:repository:
ssbd-repos-000023

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 2
size of image datasets 2.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) tissue structure

Paper information Shirai H et. al. (2016), Proc Natl Acad Sci U S A 113(1), E81-90
doi: 10.1073/pnas.1512590113
pmid: 26699487

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Project 24-Kanemura-iPSCellDyn
SSBD:repository:
ssbd-repos-000024

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 4
size of image datasets 10.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell dynamics

Paper information Kanemura H et. al. (2013), Sci Rep 3, 2334
doi: 10.1038/srep02334
pmid: 23903667

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Project 25-Ke-SeeDB
SSBD:repository:
ssbd-repos-000025

Release, Updated 2017-10-03,
2017-11-15

# of image datasets 52
size of image datasets 17.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) neuron structure

Paper information Ke MT et. al. (2013), Nat Neurosci 16(8), 1154-61
doi: 10.1038/nn.3447
pmid: 23792946

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Project 26-Kinoshita-iPSCellDyn
SSBD:repository:
ssbd-repos-000026

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 2
size of image datasets 105.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell dynamics

Paper information Kinoshita H et. al. (2016), Invest Ophthalmol Vis Sci 57(1), 153-61
doi: 10.1167/iovs.15-17610
pmid: 26780319

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Project 27-Iwasaki-iPSCellDyn
SSBD:repository:
ssbd-repos-000027

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 13
size of image datasets 327.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell/tissue structure

Paper information Iwasaki Y et. al. (2016), PLoS One 11(7), e0158282
doi: 10.1371/journal.pone.0158282
pmid: 27385038

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Project 28-Assawachananont-iPSCellTissue
SSBD:repository:
ssbd-repos-000028

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 8
size of image datasets 32.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) tissue structure

Paper information Assawachananont J et. al. (2014), Stem Cell Reports 2(5), 662-74
doi: 10.1016/j.stemcr.2014.03.011
pmid: 24936453

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Project 29-Ke-SeeDB2
SSBD:repository:
ssbd-repos-000029

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 58
size of image datasets 30.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila melanogaster, Homo sapiens, Mus musculus

DataType(s) neuron structure

Paper information Ke MT et. al. (2016), Cell Rep 14(11), 2718-32
doi: 10.1016/j.celrep.2016.02.057
pmid: 26972009

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Project 30-Inomata-CellDyn
SSBD:repository:
ssbd-repos-000030

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 5
size of image datasets 1.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Xenopus laevis

DataType(s) cell dynamics

Paper information Inomata H et. al. (2013), Cell 153(6), 1296-311
doi: 10.1016/j.cell.2013.05.004
pmid: 23746842

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Project 31-Matsuda-SigDyn
SSBD:repository:
ssbd-repos-000031

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 3
size of image datasets 252.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Cricetulus griseus, Canis lupus familiaris

DataType(s) cell dynamics

Paper information Matsuda M et. al. (2012), Sci Signal 5(220), ra31
doi: 10.1126/scisignal.2002764
pmid: 22510469

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Project 32-Matsuda-SigDyn
SSBD:repository:
ssbd-repos-000032

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 2
size of image datasets 164.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Cricetulus griseus

DataType(s) cell dynamics

Paper information Matsuda M et. al. (2015), Nat Commun 6, 6195
doi: 10.1038/ncomms7195
pmid: 25652697

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Project 33-Yamao-MolDynRho
SSBD:repository:
ssbd-repos-000033

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 19
size of image datasets 805.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell dynamics

Paper information Yamao M et. al. (2015), Sci Rep 5, 17527
doi: 10.1038/srep17527
pmid: 26634649

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Project 34-Hayashi-CellDynSDSRM
SSBD:repository:
ssbd-repos-000034

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 3
size of image datasets 104.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Canis lupus familiaris

DataType(s) organelle dynamics

Paper information Hayashi S and Okada Y (2015), Mol Biol Cell 26(9), 1743-51
doi: 10.1091/mbc.E14-08-1287
pmid: 25717185

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Project 35-Yonemura-CellDyn
SSBD:repository:
ssbd-repos-000035

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 3
size of image datasets 97.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Canis lupus familiaris, Mus musculus

DataType(s) cell dynamics

Paper information Yonemura S (2014), PLoS One 9(11), e112922
doi: 10.1371/journal.pone.0112922
pmid: 25393292

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Project 36-Torisawa-MolDynEg5
SSBD:repository:
ssbd-repos-000036

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 3
size of image datasets 7.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) -

DataType(s) microtubule dynamics

Paper information Torisawa T et. al. (2016), Biophys J 111(2), 373-385
doi: 10.1016/j.bpj.2016.06.010
pmid: 27463139

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Project 37-Arata-MolDynPar2
SSBD:repository:
ssbd-repos-000037

Release, Updated 2017-10-03,
2020-02-03

# of image datasets 3
size of image datasets 1.5 GB

# of quantitative datasets 3
size of quantitative datasets 32.6 MB

Organism(s) Caenorhabditis elegans

DataType(s) single molecule dynamics

Paper information Arata Y et. al. (2016), Cell Rep 16(8), 2156-2168
doi: 10.1016/j.celrep.2016.07.047
pmid: 27524610

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Project 38-Inoue-ShellStruct
SSBD:repository:
ssbd-repos-000038

Release, Updated 2017-10-03,
2017-11-15

# of image datasets 7
size of image datasets 9.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) D. cf. damesi (NA)

DataType(s) strucure

Paper information Inoue S and Kondo S (2016), Sci Rep 6, 33689
doi: 10.1038/srep33689
pmid: 27640361

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Project 39-Shibata-MolDynPTEN
SSBD:repository:
ssbd-repos-000039

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 2
size of image datasets 723.2 MB

# of quantitative datasets 2
size of quantitative datasets 35.8 MB

Organism(s) Dictyostelium discoideum

DataType(s) cell dynamics

Paper information Shibata T et. al. (2012), J Cell Sci 125(Pt 21), 5138-50
doi: 10.1242/jcs.108373
pmid: 22899720

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Project 40-Sakakibara-KTDyn
SSBD:repository:
ssbd-repos-000040

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 3
size of image datasets 6.0 GB

# of quantitative datasets 1
size of quantitative datasets 4.9 MB

Organism(s) Mus musculus

DataType(s) kinetochore dynamics

Paper information Sakakibara Y et. al. (2015), Nat Commun 6, 7550
doi: 10.1038/ncomms8550
pmid: 26130582

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Project 41-Hirata-XChrHiC
SSBD:repository:
ssbd-repos-000041

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 11
size of quantitative datasets 3.9 MB

Organism(s) Mus musculus

DataType(s) chromosome structure

Paper information Hirata Y et. al. (2016), Sci Rep 6, 34982
doi: 10.1038/srep34982
pmid: 27725694

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Project 43-Takai-SubcellStructONL
SSBD:repository:
ssbd-repos-000043

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 2
size of image datasets 90.0 MB

# of quantitative datasets 2
size of quantitative datasets 620.8 KB

Organism(s) Canis lupus familiaris

DataType(s) lysosomes dynamics, peroxisomes dynamics

Paper information Takai A et. al. (2015), Proc Natl Acad Sci U S A 112(14), 4352-6
doi: 10.1073/pnas.1418468112
pmid: 25831507

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Project 44-Hihara-NucleosomeDyn
SSBD:repository:
ssbd-repos-000044

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 3
size of quantitative datasets 132.9 MB

Organism(s) -

DataType(s) single molecule dynamics

Paper information Hihara S et. al. (2012), Cell Rep 2(6), 1645-56
doi: 10.1016/j.celrep.2012.11.008
pmid: 23246002

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Project 48-Susaki-MouseBrainCUBIC
SSBD:repository:
ssbd-repos-000048

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 27
size of image datasets 117.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) organ structure

Paper information Susaki EA et. al. (2014), Cell 157(3), 726-39
doi: 10.1016/j.cell.2014.03.042
pmid: 24746791

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Project 49-Susaki-MouseBrainCUBIC
SSBD:repository:
ssbd-repos-000049

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 1
size of image datasets 5.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) organ structure

Paper information Susaki EA et. al. (2015), Nat Protoc 10(11), 1709-27
doi: 10.1038/nprot.2015.085
pmid: 26448360

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Project 50-Tainaka-MouseBodyCUBIC
SSBD:repository:
ssbd-repos-000050

Release, Updated 2017-10-03,
2018-11-15

# of image datasets 40
size of image datasets 113.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) organ structure

Paper information Tainaka K et. al. (2014), Cell 159(4), 911-24
doi: 10.1016/j.cell.2014.10.034
pmid: 25417165

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Project 52-Suzuki-FrogTailDyn
SSBD:repository:
ssbd-repos-000052

Release, Updated 2017-10-03

# of image datasets 1
size of image datasets 16.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Xenopus laevis

DataType(s) cell dynamics

Paper information Suzuki M et. al. (2016), Genes Cells 21(4), 358-69
doi: 10.1111/gtc.12349
pmid: 26914410

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Project 53-Ichimura-CellDyn
SSBD:repository:
ssbd-repos-000053

Release, Updated 2017-10-03

# of image datasets 4
size of image datasets 320.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell dynamics

Paper information Ichimura T et. al. (2016), Sci Rep 6, 37562
doi: 10.1038/srep37562
pmid: 27876845

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Project 20-Azuma-WormMembrane
SSBD:repository:
ssbd-repos-000020

Release, Updated 2017-03-01,
2017-11-15

# of image datasets 1
size of image datasets 19.8 MB

# of quantitative datasets 1
size of quantitative datasets 76.1 MB

Organism(s) Caenorhabditis elegans

DataType(s) cellular dynamics

Paper information Azuma Y and Onami S (2017), BMC Bioinformatics 18(1), 307
doi: 10.1186/s12859-017-1717-6
pmid: 28629355

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Project 12-Takayama-Oocyte
SSBD:repository:
ssbd-repos-000012

Release, Updated 2016-10-03,
2020-02-03

# of image datasets 119
size of image datasets 4.7 GB

# of quantitative datasets 119
size of quantitative datasets 3.7 GB

Organism(s) Caenorhabditis elegans

DataType(s) oocyte shape dynamics

Paper information Takayama J and Onami S (2016), Cell Rep 15(3), 625-637
doi: 10.1016/j.celrep.2016.03.040
pmid: 27068469

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Project 14-Ochiai-MolDynMS2
SSBD:repository:
ssbd-repos-000014

Release, Updated 2016-10-03,
2018-11-15

# of image datasets 1
size of image datasets 4.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) gene expression dynamics

Paper information Ochiai H et. al. (2015), Nucleic Acids Res 43(19), e127
doi: 10.1093/nar/gkv624
pmid: 26092696

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Project 16-Tanaka-FluidDyn
SSBD:repository:
ssbd-repos-000016

Release, Updated 2016-10-03,
2018-11-15

# of image datasets 4
size of image datasets 241.0 MB

# of quantitative datasets 2
size of quantitative datasets 2.6 MB

Organism(s) Mus musculus

DataType(s) fluid dynamics, cell dynamics

Paper information Tanaka, Yo and Fujita, Hideaki (2015), Sensors and Actuators B: Chemical 210, 267-272
doi: 10.1016/j.snb.2014.12.069

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Project 17-Aoki-MolDyn
SSBD:repository:
ssbd-repos-000017

Release, Updated 2016-10-03,
2018-11-15

# of image datasets 2
size of image datasets 157.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Rattus norvegicus

DataType(s) cell dynamics

Paper information Aoki K et. al. (2013), Mol Cell 52(4), 529-40
doi: 10.1016/j.molcel.2013.09.015
pmid: 24140422

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Project 18-Kunida-MolDynRho
SSBD:repository:
ssbd-repos-000018

Release, Updated 2016-10-03,
2018-11-15

# of image datasets 2
size of image datasets 111.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell dynamics

Paper information Kunida K et. al. (2012), J Cell Sci 125(Pt 10), 2381-92
doi: 10.1242/jcs.096859
pmid: 22344265

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Project 19-Tanaka-FluidDyn
SSBD:repository:
ssbd-repos-000019

Release, Updated 2016-10-03,
2018-11-15

# of image datasets 1
size of image datasets 1.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) -

DataType(s) fluid dynamics

Paper information Tanaka, Yo (2014), Micromachines 5(2), 289-299
doi: 10.3390/mi5020289

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Project 11-Toyoshima-NeuAct
SSBD:repository:
ssbd-repos-000011

Release, Updated 2016-05-20,
2018-11-15

# of image datasets 14
size of image datasets 20.4 GB

# of quantitative datasets 14
size of quantitative datasets 67.8 MB

Organism(s) Caenorhabditis elegans

DataType(s) neuronal nuclear dynamics

Paper information Toyoshima Y et. al. (2016), PLoS Comput Biol 12(6), e1004970
doi: 10.1371/journal.pcbi.1004970
pmid: 27271939

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Project 13-Watabe-MolDyn
SSBD:repository:
ssbd-repos-000013

Release, Updated 2016-01-18,
2018-11-15

# of image datasets 2
size of image datasets 496.3 KB

# of quantitative datasets 4
size of quantitative datasets 151.4 GB

Organism(s) Dictyostelium discoideum, Rattus norvegicus

DataType(s) single molecule dynamics

Paper information Watabe M et. al. (2015), PLoS One 10(7), e0130089
doi: 10.1371/journal.pone.0130089
pmid: 26147508

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Project 15-Harima-GeneExp
SSBD:repository:
ssbd-repos-000015

Release, Updated 2016-01-18,
2018-11-15

# of image datasets 2
size of image datasets 398.1 KB

# of quantitative datasets 2
size of quantitative datasets 649.4 KB

Organism(s) Mus musculus

DataType(s) gene expression data

Paper information Harima Y et. al. (2013), Cell Rep 3(1), 1-7
doi: 10.1016/j.celrep.2012.11.012
pmid: 23219549

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Project 10-Komatsuzaki-MolDyn
SSBD:repository:
ssbd-repos-000010

Release, Updated 2015-10-03,
2018-11-15

# of image datasets 1
size of image datasets 450.0 MB

# of quantitative datasets 1
size of quantitative datasets 2.4 MB

Organism(s) Dictyostelium discoideum

DataType(s) single molecule dynamics

Paper information Komatsuzaki A et. al. (2015), Small 11(12), 1396-401
doi: 10.1002/smll.201402508
pmid: 25504902

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Project 7-Cronin-WormLocomotion
SSBD:repository:
ssbd-repos-000007

Release, Updated 2014-10-03,
2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 11
size of quantitative datasets 150.4 MB

Organism(s) Caenorhabditis elegans

DataType(s) behavior

Paper information Cronin CJ et. al. (2005), BMC Genet 6, 5
doi: 10.1186/1471-2156-6-5
pmid: 15698479

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Project 8-Bashar-MouseEmbryo
SSBD:repository:
ssbd-repos-000008

Release, Updated 2014-10-03,
2018-11-15

# of image datasets 1
size of image datasets 157.0 MB

# of quantitative datasets 1
size of quantitative datasets 1.3 MB

Organism(s) Mus musculus

DataType(s) nuclear positions

Paper information Bashar MK et. al. (2012), PLoS One 7(5), e35550
doi: 10.1371/journal.pone.0035550
pmid: 22590505

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Project 9-Masumoto-Transcriptome
SSBD:repository:
ssbd-repos-000009

Release, Updated 2014-10-03,
2017-10-03

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 8
size of quantitative datasets 97.0 MB

Organism(s) Mus musculus

DataType(s) gene expression data

Paper information Masumoto KH et. al. (2010), Curr Biol 20(24), 2199-206
doi: 10.1016/j.cub.2010.11.038
pmid: 21129973

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Project 1-Bao-WormEmbryo
SSBD:repository:
ssbd-repos-000001

Release, Updated 2013-10-03,
2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 1
size of quantitative datasets 22.9 MB

Organism(s) Caenorhabditis elegans

DataType(s) nuclear division dynamics

Paper information Bao Z et. al. (2006), Proc Natl Acad Sci U S A 103(8), 2707-12
doi: 10.1073/pnas.0511111103
pmid: 16477039

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Project 4-Keller-FlyEmbryo
SSBD:repository:
ssbd-repos-000004

Release, Updated 2013-10-03,
2019-04-24

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 2
size of quantitative datasets 4.0 GB

Organism(s) Drosophila melanogaster

DataType(s) nuclear positions

Paper information Keller PJ et. al. (2010), Nat Methods 7(8), 637-42
doi: 10.1038/nmeth.1476
pmid: 20601950

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Project 5-Keller-FishEmbryo
SSBD:repository:
ssbd-repos-000005

Release, Updated 2013-10-03,
2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 7
size of quantitative datasets 48.2 GB

Organism(s) Danio rerio

DataType(s) nuclear positions

Paper information Keller PJ et. al. (2008), Science 322(5904), 1065-9
doi: 10.1126/science.1162493
pmid: 18845710

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Project 2-Kyoda-WormEmbryoRNAi
SSBD:repository:
ssbd-repos-000002

Release, Updated 2013-09-02,
2020-02-03

# of image datasets 187
size of image datasets 1.5 TB

# of quantitative datasets 186
size of quantitative datasets 136.1 GB

Organism(s) Caenorhabditis elegans

DataType(s) nuclear division dynamics

Paper information Kyoda K et. al. (2013), Nucleic Acids Res 41(Database issue), D732-7
doi: 10.1093/nar/gks1107
pmid: 23172286

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Project 6-Arjunan-MolDyn
SSBD:repository:
ssbd-repos-000006

Release, Updated 2013-09-02,
2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 1
size of quantitative datasets 190.8 MB

Organism(s) Escherichia coli

DataType(s) single molecule dynamics

Paper information Arjunan SN and Tomita M (2010), Syst Synth Biol 4(1), 35-53
doi: 10.1007/s11693-009-9047-2
pmid: 20012222