Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig1C_1
# 1379
Datast ID Fig1C_1
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1C_2
# 1380
Datast ID Fig1C_2
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1C_3
# 1381
Datast ID Fig1C_3
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1C_4
# 1382
Datast ID Fig1C_4
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior1_50_1
# 1383
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior1_50_2
# 1384
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_anterior1_50_3
# 1385
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior1_50_4
# 1386
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_anterior1_100_1
# 1387
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_100_2
# 1388
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_100_3
# 1389
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_100_4
# 1390
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_200_1
# 1391
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_200_2
# 1392
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_200_3
# 1393
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_200_4
# 1394
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_300_1
# 1395
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_300_2
# 1396
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_300_3
# 1397
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior1_300_4
# 1398
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_anterior2_50_1
# 1399
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior2_50_2
# 1400
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_50_3
# 1401
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior2_50_4
# 1402
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_100_1
# 1403
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_100_2
# 1404
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_100_3
# 1405
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_100_4
# 1406
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_200_1
# 1407
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_200_2
# 1408
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_200_3
# 1409
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_anterior2_200_4
# 1410
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior2_300_1
# 1411
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior2_300_2
# 1412
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior2_300_3
# 1413
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior2_300_4
# 1414
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_50_1
# 1415
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_50_2
# 1416
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_50_3
# 1417
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_50_4
# 1418
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_100_1
# 1419
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_100_2
# 1420
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_100_3
# 1421
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_100_4
# 1422
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_200_1
# 1423
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_200_2
# 1424
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_200_3
# 1425
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1D_anterior3_200_4
# 1426
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_300_1
# 1427
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1D_anterior3_300_2
# 1428
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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