Summary of 179-Kobachi-BLVRAactivity
Title
Fluorescence images of biliverdin reductase-A (BLVRA) activity in WT or BLVRA KO mice or HeLa cells.
Kind
Image data
based on Experiment
Number of Datasets
89
( Image datasets: 89,
Quantitative data datasets: 0 )
Size of Datasets
2.0 GB
( Image datasets: 2.0 GB,
Quantitative data datasets: 0 bytes )
Organism(s)
Mus musculus, Homo sapiens
Gene symbol(s)
Bivra, NuCyM
Molecular Function (MF)
biliverdin reductase
Biological Process (BP)
-
Cellular Component (CC)
cytoplasm, NA
Biological Imaging Method
fluorescence microscopy, confocal microscopy
X scale
0.248 micrometer/pixel, 0.621 micrometer/pixel, 1.242 micrometer/pixel, 0.994 micrometer/pixel
Y scale
0.248 micrometer/pixel, 0.621 micrometer/pixel, 1.242 micrometer/pixel, 0.994 micrometer/pixel
Z scale
2 micrometer/slice, 3 micrometer/slice, 1 micrometer/slice
T scale
27 sec per time interval, 28 sec per time interval, 22 sec per time interval, 144 sec per time interval, 23 sec per time interval, 26 sec per time interval, 143 sec per time interval, 145 sec per time interval, 31 sec per time interval, 1 sec per time interval, 30 sec per time interval, 120 sec per time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Kenju Kobachi, Sota Kuno, Shinya Sato, Kenta Sumiyama, Michiyuki Matsuda, Kenta Terai (2020) Biliverdin Reductase-A Deficiency Brighten and Sensitize Biliverdin-binding Chromoproteins., Cell structure and function, Volume 45, Number 2, pp. 131-141
Published in 2020 Aug 21
(Electronic publication in June 25, 2020, midnight )
(Abstract) Tissue absorbance, light scattering, and autofluorescence are significantly lower in the near-infrared (NIR) range than in the visible range. Because of these advantages, NIR fluorescent proteins (FPs) are in high demand for in vivo imaging. Nevertheless, application of NIR FPs such as iRFP is still limited due to their dimness in mammalian cells. In contrast to GFP and its variants, iRFP requires biliverdin (BV) as a chromophore. The dimness of iRFP is at least partly due to rapid reduction of BV by biliverdin reductase-A (BLVRA). Here, we established biliverdin reductase-a knockout (Blvra(-/-)) mice to increase the intracellular BV concentration and, thereby, to enhance iRFP fluorescence intensity. As anticipated, iRFP fluorescence intensity was significantly increased in all examined tissues of Blvra(-/-) mice. Similarly, the genetically encoded calcium indicator NIR-GECO1, which is engineered based on another NIR FP, mIFP, exhibited a marked increase in fluorescence intensity in mouse embryonic fibroblasts derived from Blvra(-/-) mice. We expanded this approach to an NIR light-sensing optogenetic tool, the BphP1-PpsR2 system, which also requires BV as a chromophore. Again, deletion of the Blvra gene markedly enhanced the light response in HeLa cells. These results indicate that the Blvra(-/-) mouse is a versatile tool for the in vivo application of NIR FPs and NIR light-sensing optogenetic tools.Key words: in vivo imaging, near-infrared fluorescent protein, biliverdin, biliverdin reductase, optogenetic tool.
(MeSH Terms)
Contact
Kenta Terai
, Graduate School of Medicine, Kyoto University
, Department of Pathology and Biology of Diseases
SSBD:OMERO.gallery Project
SSBD:OMERO Project
Dataset List of 179-Kobachi-BLVRAactivity
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (10.0 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.1 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.8 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.7 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (20.1 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.1 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.8 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.8 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.2 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.4 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.0 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.6 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.8 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.7 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.8 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (14.4 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.4 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (14.0 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (14.6 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.8 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.6 MB)
Dataset Kind
Image data
Dataset Size
21.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (14.3 MB)
Dataset Kind
Image data
Dataset Size
19.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (12.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.0 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (20.1 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.6 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.7 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.7 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (20.1 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.2 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.2 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.0 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.4 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.6 MB)
Dataset Kind
Image data
Dataset Size
24.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (15.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.7 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.6 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.7 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (10.0 MB)
Dataset Kind
Image data
Dataset Size
13.9 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (9.8 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.9 MB)
Dataset Kind
Image data
Dataset Size
23.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (15.5 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.0 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.1 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.1 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.4 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.9 MB)
Dataset Kind
Image data
Dataset Size
27.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (18.0 MB)
Dataset Kind
Image data
Dataset Size
91.1 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (6.4 KB)
Dataset Kind
Image data
Dataset Size
91.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (6.3 KB)
Dataset Kind
Image data
Dataset Size
31.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.8 MB)
Dataset Kind
Image data
Dataset Size
31.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.6 MB)
Dataset Kind
Image data
Dataset Size
31.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (19.3 MB)
Dataset Kind
Image data
Dataset Size
31.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (15.9 MB)
Dataset Kind
Image data
Dataset Size
31.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (17.0 MB)
Dataset Kind
Image data
Dataset Size
24.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (13.5 MB)
Dataset Kind
Image data
Dataset Size
41.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (27.7 MB)
Dataset Kind
Image data
Dataset Size
41.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (27.8 MB)
Dataset Kind
Image data
Dataset Size
41.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (27.7 MB)
Dataset Kind
Image data
Dataset Size
41.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (25.4 MB)
Dataset Kind
Image data
Dataset Size
41.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (24.2 MB)
Dataset Kind
Image data
Dataset Size
41.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (23.9 MB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)
Dataset Kind
Image data
Dataset Size
46.0 KB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (3.5 KB)