Summary of 178-konagaya-CellMigration


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Images and BDML file for quantitative information of ERK activity in myogenic cell migration during mouse muscle regneration.
Description
-
Release date
2022-03-31
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
160 ( Image datasets: 160, Quantitative data datasets: 0 )
Size of Datasets
55.5 GB ( Image datasets: 55.5 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein name(s)
CDK1 inhibitor, CDK1_2 inhibitor, CDK4_6 inhibitor, MEK inhibitor
Reporter(s)
EKAREV, EKAREV-NLS, Fucci, mVenus-hGeminin, tdKeima

Datatype
-
Molecular Function (MF)
extracellular signal-regulated kinase activity
Biological Process (BP)
cell migration
Cellular Component (CC)
-
Biological Imaging Method
two-photon laser scanning microscopy, differential interference contrast microscopy, time lapse microscopy, fluorescence microscopy
X scale
0.397 micrometer/pixel, 1.325 micrometer/pixel, 1.59 micrometer/pixel, 0.621 micrometer/pixel, 0.795 micrometer/pixel, 1.2034 micrometer/pixel, 1.988 micrometer/pixel
Y scale
0.397 micrometer/pixel, 1.325 micrometer/pixel, 1.59 micrometer/pixel, 0.621 micrometer/pixel, 0.795 micrometer/pixel, 1.2034 micrometer/pixel, 1.988 micrometer/pixel
Z scale
1 micrometer/slice, 2 micrometer/slice, 24 micrometer/slice, 10 micrometer/slice, 5 micrometer/slice
T scale
267 sec for each time interval, 283 sec for each time interval, 314 sec for each time interval, 306 sec per time interval, 290 sec per time interval, 268.32 sec per time interval, 341 sec for each time interval, 300 sec per time interval, 259 sec for each time interval, 272 sec for each time interval, 274 sec per time interval, 285 sec for each time interval, 1 sec per time interval, NA, 238.06 sec per time interval, 305 sec per time interval, 287 sec for each time interval, 314.85 sec per time interval, 295 sec for each time interval, 300 sec for each time interval, 316 sec for each time interval, 266 sec per time interval, 278.2 sec per time interval, 308 sec per time interval, 284 sec per time interval, 270.06 sec per time interval, 311 sec per time interval, 306 sec for each time interval, 92 sec for each time interval, 320 sec for each time interval, 322 sec per time interval, 319 sec per time interval, 308 sec for each time interval, 264 sec per time interval, 328 sec per time interval, 258 sec for each time interval, 265 sec for each time interval, 382 sec for each time interval, 307 sec per time interval, 294 sec per time interval, 273 sec for each time interval, 319 sec for each time interval, 277 sec for each time interval, 278 sec per time interval, 234 sec per time interval, 1 sec for each time interval, 314 sec per time interval, 313 sec per time interval, 307 sec for each time interval, 282 sec for each time interval, 291 sec for each time interval, 240 sec per time interval, 297 sec for each time interval, 237 sec for each time interval, 312 sec per time interval, 260 sec for each time interval, 310 sec for each time interval, 292 sec for each time interval, 328.2 sec per time interval, 284 sec for each time interval, 303 sec for each time interval, 309 sec for each time interval, 263 sec for each time interval, 288 sec per time interval, 286 sec for each time interval, 301 sec for each time interval, 284.5 sec per time interval, 281 sec per time interval, 258 sec per time interval, 280 sec for each time interval, 267 sec per time interval

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yumi Konagaya, Kanako Takakura, Maina Sogabe, Anjali Bisaria, Chad Liu, Tobias Meyer, Atsuko Sehara-Fujisawa, Michiyuki Matsuda, Kenta Terai (2020) Intravital imaging reveals cell cycle-dependent myogenic cell migration during muscle regeneration., Cell cycle (Georgetown, Tex.), Volume 19, Number 22, pp. 3167-3181

Published in 2020 Nov (Electronic publication in Nov. 1, 2020, midnight )

(Abstract) During muscle regeneration, extracellular signal-regulated kinase (ERK) promotes both proliferation and migration. However, the relationship between proliferation and migration is poorly understood in this context. To elucidate this complex relationship on a physiological level, we established an intravital imaging system for measuring ERK activity, migration speed, and cell-cycle phases in mouse muscle satellite cell-derived myogenic cells. We found that in vivo, ERK is maximally activated in myogenic cells two days after injury, and this is then followed by increases in cell number and motility. With limited effects of ERK activity on migration on an acute timescale, we hypothesized that ERK increases migration speed in the later phase by promoting cell-cycle progression. Our cell-cycle analysis further revealed that in myogenic cells, ERK activity is critical for G1/S transition, and cells migrate more rapidly in S/G2 phase 3 days after injury. Finally, migration speed of myogenic cells was suppressed after CDK1/2-but not CDK1-inhibitor treatment, demonstrating a critical role of CDK2 in myogenic cell migration. Overall, our study demonstrates that in myogenic cells, the ERK-CDK2 axis promotes not only G1/S transition but also migration, thus providing a novel mechanism for efficient muscle regeneration.
(MeSH Terms)

Contact
Kenta Terai , Graduate School of Medicine, Kyoto University , Department of Pathology and Biology of Diseases , Department of Pathology and Biology of Diseases
Contributors
Yumi Konagaya

Dataset List of 178-konagaya-CellMigration

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1_2i_N4_lapse7
# 7062
Dataset Kind Image data
Dataset Size 375.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1_2i_N4_lapse8
# 7063
Dataset Kind Image data
Dataset Size 307.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N1_lapse1
# 7064
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N1_lapse2
# 7065
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N1_lapse3
# 7066
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N1_lapse4
# 7067
Dataset Kind Image data
Dataset Size 103.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N1_lapse5
# 7068
Dataset Kind Image data
Dataset Size 341.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N1_lapse6
# 7069
Dataset Kind Image data
Dataset Size 69.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse1
# 7070
Dataset Kind Image data
Dataset Size 443.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse2
# 7071
Dataset Kind Image data
Dataset Size 307.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse3
# 7072
Dataset Kind Image data
Dataset Size 171.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse4
# 7073
Dataset Kind Image data
Dataset Size 69.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse5
# 7074
Dataset Kind Image data
Dataset Size 205.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse6
# 7075
Dataset Kind Image data
Dataset Size 375.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N2_lapse7
# 7076
Dataset Kind Image data
Dataset Size 307.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N3_lapse1
# 7077
Dataset Kind Image data
Dataset Size 443.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N3_lapse2
# 7078
Dataset Kind Image data
Dataset Size 137.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N3_lapse3
# 7079
Dataset Kind Image data
Dataset Size 443.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N3_lapse4
# 7080
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK1i_N3_lapse5
# 7081
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N1_lapse1
# 7082
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N1_lapse2
# 7083
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N1_lapse3
# 7084
Dataset Kind Image data
Dataset Size 69.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N1_lapse4
# 7085
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N1_lapse5
# 7086
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N2_lapse1
# 7087
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N2_lapse2
# 7088
Dataset Kind Image data
Dataset Size 443.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N2_lapse3
# 7089
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N2_lapse4
# 7090
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse1
# 7091
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse2
# 7092
Dataset Kind Image data
Dataset Size 69.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse3
# 7093
Dataset Kind Image data
Dataset Size 171.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse4
# 7094
Dataset Kind Image data
Dataset Size 171.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse5
# 7095
Dataset Kind Image data
Dataset Size 205.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse6
# 7096
Dataset Kind Image data
Dataset Size 103.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse7
# 7097
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse8
# 7098
Dataset Kind Image data
Dataset Size 273.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_CDK4_6i_N3_lapse9
# 7099
Dataset Kind Image data
Dataset Size 103.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N1_lapse1
# 7100
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N1_lapse2
# 7101
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N1_lapse3
# 7102
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N1_lapse4
# 7103
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N2_lapse1
# 7104
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N2_lapse2
# 7105
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N2_lapse3
# 7106
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N2_lapse4
# 7107
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N3_lapse1
# 7108
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N3_lapse2
# 7109
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N3_lapse3
# 7110
Dataset Kind Image data
Dataset Size 443.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5_myogenicCell_DMSO_N3_lapse4
# 7111
Dataset Kind Image data
Dataset Size 409.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data