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Detail of Rat_ERK_LSCM_SIM

Project
13-Watabe-MolDyn
SSBD:Repository
ssbd-repos-000013
Title
BDML file for quantitative information about ERK nuclear translocation dynamics obtained by a laser-scanning confocal microscopy (LSCM) simulation module
Description
NA
Release, Updated
2016-01-18,
2018-11-15
License
CC BY
Kind
Quantitative data based on Simulation
File Formats
Data size
132.4 GB
Organism
Rattus norvegicus ( NCBI:txid10116 )
Strain(s)
PC-12
Cell Line
-
Datatype
single molecule dynamics
Molecular Function (MF)
Biological Process (BP)
cellular protein localization ( GO:0034613 )
Cellular Component (CC)
-
Biological Imaging Method
XYZ Scale
XY: 1 micrometer, Z: 1 micrometer
T scale
0.1 second for each time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
See details in Watabe et al. (2015) PLoS One, 10(7): e0130089
Related paper(s)
Contact
Koichi Takahashi , RIKEN , Quantitative Biology Center , Laboratory for Biochemical Simulation
Contributors
Masaki Watabe, Satya N. V. Arjunan, Seiya Fukushima, Kazunari Iwamoto, Jun Kozuka, Satomi Matsuoka, Yuki Shindo, Masahiro Ueda, Koichi Takahashi
Local ID
Rat_ERK_LSCM_SIM
BDML ID
fcb710b2-e94b-4c7c-a9c9-876ef1fb3c4e
BDML/BD5
https://ssbd.riken.jp/data/13-Watabe-MolDyn/bdml/Rat_ERK_LSCM_SIM_bdml3.0.zip (19.8 GB)