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Detail of NA_TMR_TIRFM_SIM

Project
13-Watabe-MolDyn
SSBD:Repository
ssbd-repos-000013
Title
BDML file for quantitative information about particle dynamics obtained by a total internal reflection fluorescence microscopy (TIRFM) simulation module
Description
NA
Release, Updated
2016-01-18,
2018-11-15
License
CC BY
Kind
Quantitative data based on Simulation
File Formats
Data size
36.6 MB
Organism
-
Strain(s)
-
Cell Line
-
Datatype
single molecule dynamics
Molecular Function (MF)
Biological Process (BP)
cellular protein localization ( GO:0034613 )
Cellular Component (CC)
-
Biological Imaging Method
XYZ Scale
XY: 1 micrometer, Z: 1 micrometer
T scale
0.003 second for each time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
See details in Watabe et al. (2015) PLoS One, 10(7): e0130089
Related paper(s)
Contact
Koichi Takahashi , RIKEN , Quantitative Biology Center , Laboratory for Biochemical Simulation
Contributors
Masaki Watabe, Satya N. V. Arjunan, Seiya Fukushima, Kazunari Iwamoto, Jun Kozuka, Satomi Matsuoka, Yuki Shindo, Masahiro Ueda, Koichi Takahashi
Local ID
NA_TMR_TIRFM_SIM
BDML ID
54d6e874-c1f6-4420-8717-e1506f0ef01b
BDML/BD5
https://ssbd.riken.jp/data/13-Watabe-MolDyn/bdml/NA_TMR_TIRFM_SIM_bdml3.0.zip (1.7 MB)