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Detail of 140911_DiR_x1_worm2

Project
11-Toyoshima-NeuAct
SSBD:Repository
ssbd-repos-000011
Title
BDML file for quantitative information about neuronal nuclei in C. elegans (strain JN2100) adult extracted from 3D single-channel laser-scanning confocal microscopy (LSCM) images
Description
NA
Release, Updated
2016-05-20,
2018-11-15
License
CC BY-NC-SA
Kind
Quantitative data based on Experiment , related Image data - 140911_DiR_x1_worm2
File Formats
Data size
110.6 KB
Organism
Caenorhabditis elegans ( NCBI:txid6239 )
Strain(s)
-
Cell Line
-
Datatype
neuronal nuclear dynamics
Molecular Function (MF)
Biological Process (BP)
-
Cellular Component (CC)
nucleus ( GO:0005634 )
Biological Imaging Method
XYZ Scale
XY: 0.24 micrometer/pixel, Z: 0.252 micrometer/slice
T scale
0 second for each time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
See details in Toyoshima et al. (2016) PLoS Computational Biology, 12(6):e1004970
Related paper(s)
Contact
Yu Toyoshima , The University of Tokyo , Department of Biological Sciences , Iino Laboratory
Contributors
Yu Toyoshima, Terumasa Tokunaga, Osamu Hirose, Manami Kanamori, Takayuki Teramoto, Moon Sun Jang, Sayuri Kuge, Takeshi Ishihara, Ryo Yoshida, Yuichi Iino
Local ID
140911_DiR_x1_worm2
BDML ID
8f98479d-aba6-4d4e-b4e5-8938261e2bce
BDML/BD5
https://ssbd.riken.jp/data/11-Toyoshima-NeuAct/bdml/140911_DiR_x1_worm2_bdml3.0.zip (11.8 KB)
External Link
http://dx.doi.org/10.6084/m9.figshare.3184546
Source
https://ssbd.riken.jp/data/11-Toyoshima-NeuAct/source/140911_DiR_x1_worm2.zip (135.4 MB)