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Detail of Eco_MinE_AS

Project
6-Arjunan-MolDyn
SSBD:Repository
ssbd-repos-000006
Title
BDML file for quantitative information about single molecule dynamics of E. coli wild-type
Description
NA
Release, Updated
2013-09-02,
2018-11-15
License
CC BY-NC-SA
Kind
Quantitative data based on Simulation
File Formats
Data size
190.8 MB
Organism
Escherichia coli ( NCBI:txid562 )
Strain(s)
-
Cell Line
-
Datatype
single molecule dynamics
Molecular Function (MF)
Biological Process (BP)
cellular protein localization ( GO:0034613 )
Cellular Component (CC)
-
Biological Imaging Method
XYZ Scale
XY: 1.0 micrometer/pixel, Z: 1.0 micrometer/frame
T scale
0.5 microsecond for each time interval
Image Acquisition
Experiment type
Other
Microscope type
Other
Acquisition mode
Other
Contrast method
Other
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
See details in Arjunan et al. (2010) Syst Synth Biol., 4(1): 35-53.
Related paper(s)
Contact
Satya Nanda Vel Arjunan , Keio University , Institute for Advanced Biosciences
Contributors
Satya Nanda Vel Arjunan, Masaru Tomita
Local ID
Eco_MinE_AS
BDML ID
f7962e11-1015-409a-ade7-bb38545bbe43
BDML/BD5
https://ssbd.riken.jp/data/6-Arjunan-MolDyn/bdml/Eco_MinE_AS_bdml3.0.zip (14.3 MB)
Source
https://github.com/ecell/spatiocyte/blob/master/samples/2010.arjunan.syst.synth.biol/2010.arjunan.syst.synth.biol.wt.em (0 bytes)
Workflow
https://ssbd.riken.jp/data/pdpml/6-Arjunan-MolDyn_pdpml1.0.xml