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Detail of zebrafish_animal_b

Project
5-Keller-FishEmbryo
SSBD:Repository
ssbd-repos-000005
Title
BDML file for reconstruction of the zebrafish animal hemisphere (B)
Description
NA
Release, Updated
2013-10-03,
2018-11-15
License
CC BY-NC-SA
Kind
Quantitative data based on Experiment
File Formats
Data size
9.2 GB
Organism
Danio rerio ( NCBI:txid7955 )
Strain(s)
-
Cell Line
-
Datatype
nuclear positions
Molecular Function (MF)
Biological Process (BP)
embryo development ( GO:0009790 )
Cellular Component (CC)
nucleus ( GO:0005634 )
Biological Imaging Method
XYZ Scale
XY: 1.0 micrometer/pixel, Z: 1.0 micrometer/frame
T scale
90 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
Other
Contrast method
Other
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
See details in Keller et al. (2008) Science, 322(5904): 1065-1069.
Related paper(s)
Contact
Philipp J. Keller , European Molecular Biology Laboratory , Cell Biology and Biophysics Unit
Contributors
Philipp J. Keller, Annette D. Schmidt, Joachim Wittbrodt, Ernst H.K. Stelzer
Local ID
zebrafish_animal_b.mat
BDML ID
None
BDML/BD5
https://ssbd.riken.jp/data/5-Keller-FishEmbryo/bdml/zebrafish_animal_b_bdml3.0.zip (1.7 GB)
Workflow
https://ssbd.riken.jp/data/pdpml/5-Keller-FishEmbryo_pdpml1.0.xml