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Detail of RNAi_Y47D3A.d_040930_02

Project
2-Kyoda-WormEmbryoRNAi
SSBD:Repository
ssbd-repos-000002
Title
BDML file for quantitative information about nuclear division dynamics of Y47D3A.29(RNAi) embryo
Description
quantitative information about nuclear division dynamics of Y47D3A.29(RNAi) embryo (pie-1(RNAi) embryo)
Release, Updated
2013-09-02,
2020-02-03
License
CC BY-SA
Kind
Quantitative data based on Experiment , related Image data - RNAi_Y47D3A.d_040930_02
File Formats
Data size
1.2 GB
Organism
Caenorhabditis elegans ( NCBI:txid6239 )
Strain(s)
-
Cell Line
-
Datatype
nuclear division dynamics
Molecular Function (MF)
Biological Process (BP)
embryo development ( GO:0009790 )
Cellular Component (CC)
nucleus ( GO:0005634 )
Biological Imaging Method
XYZ Scale
XY: 0.105 micrometer/pixel, Z: 0.5 micrometer/slice
T scale
40 second for each time interval
Image Acquisition
Experiment type
TimeLapse
Microscope type
DifferentInterferenceContrastMicroscope
Acquisition mode
-
Contrast method
DIC
Microscope model
Leica DMRE
Detector model
Hamamatsu Photonics ORCA C4742-95
Objective model
Leica HCX PL Apo 100x/1.40 O
Filter set
-
Summary of Methods
See details in Kyoda et al. (2013) Nucleic Acids Res 41, D732-D737
Related paper(s)
Contact
Shuichi Onami , RIKEN , Quantitative Biology Center , Laboratory for Developmental Dynamics
Contributors
Eru Adachi, Eriko Masuda, Yoko Nagai, Yoko Suzuki, Taeko Oguro, Koji Kyoda, Shuichi Onami
Local ID
Y47D3A.d(gPCR)040930_02
BDML ID
66082026-5e7d-4cb7-a011-f82d032f278e
BDML/BD5
https://ssbd.riken.jp/data/2-Kyoda-WormEmbryoRNAi/bdml/RNAi_Y47D3A.d_040930_02_bdml3.0.zip (42.2 MB)
Source
https://ssbd.riken.jp/data/2-Kyoda-WormEmbryoRNAi/source/RNAi_Y47D3A.d_040930_02.zip (4.9 GB)
Workflow
https://ssbd.riken.jp/data/pdpml/2-Kyoda-WormEmbryoRNAi_pdpml1.0.xml