Detail of Fig3A_5dasLeafPrimordia_WT_06


Project
SSBD:Repository
Title
Z-series images of 5 DAS leaf primordia of WT-Arabidopsis thaliana_sample6 stained with BCECF-AM (vacuole) and FM4-64 (plasma membrane)
Description
The 5 DAS (Days After Sowing) leaf primordia of wild-type (WT) Arabidopsis thaliana sample6 stained with BCECF-AM, used as the fluorescent indicator for vacuole, and FM4-64, used as the dye for plasma membrane. Z-series images were obtained by confocal microscopy. The size and shape of vacuole in the WT were small and dispersed.
Release, Updated
2026-07-07
License
CC BY 4.0
Kind
Image data
File Formats
oir
Data size
289.9 MB

Organism
Arabidopsis thaliana
Strain(s)
Col-0
Cell Line
plasma membrane

Datatype
-
Molecular Function (MF)
Biological Process (BP)
cell population proliferation cell differentiation cell division
Cellular Component (CC)
vacuole plasma membrane
Biological Imaging Method
confocal microscopy (FBbi_00000251)
X scale
0.124 micrometer
Y scale
0.124 micrometer
Z scale
0.42 micrometer
T scale
-

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Summary of Methods
Ezaki K, Koga H, Takeda-Kamiya N, Toyooka K, Higaki T, Sakamoto S, Tsukaya H. Precocious cell differentiation occurs in proliferating cells in leaf primordia in Arabidopsis angustifolia3 mutant. Front Plant Sci. 2024 Apr 16;15:1322223.
Related paper(s)

Kazune Ezaki, Hiroyuki Koga, Noriko Takeda-Kamiya, Kiminori Toyooka, Takumi Higaki, Shingo Sakamoto, Hirokazu Tsukaya (2024) Precocious cell differentiation occurs in proliferating cells in leaf primordia in Arabidopsis angustifolia3 mutant., Frontiers in plant science, Volume 15, pp. 1322223

Published in 2024 (Electronic publication in April 16, 2024, midnight )

(Abstract) During leaf development, the timing of transition from cell proliferation to expansion is an important factor in determining the final organ size. However, the regulatory system involved in this transition remains less understood. To get an insight into this system, we investigated the compensation phenomenon, in which the cell number decreases while the cell size increases in organs with determinate growth. Compensation is observed in several plant species suggesting coordination between cell proliferation and expansion. In this study, we examined an Arabidopsis mutant of ANGUSTIFOLIA 3 (AN3)/GRF-INTERACTING FACTOR 1, a positive regulator of cell proliferation, which exhibits the compensation. Though the AN3 role has been extensively investigated, the mechanism underlying excess cell expansion in the an3 mutant remains unknown. Focusing on the early stage of leaf development, we performed kinematic, cytological, biochemical, and transcriptome analyses, and found that the cell size had already increased during the proliferation phase, with active cell proliferation in the an3 mutant. Moreover, at this stage, chloroplasts, vacuoles, and xylem cells developed earlier than in the wild-type cells. Transcriptome data showed that photosynthetic activity and secondary cell wall biosynthesis were activated in an3 proliferating cells. These results indicated that precocious cell differentiation occurs in an3 cells. Therefore, we suggest a novel AN3 role in the suppression of cell expansion/differentiation during the cell proliferation phase.

Contact
Kazune Ezaki, Hirokazu Tsukaya , The University of Tokyo, The University of Tokyo , Department of Biological Sciences, Graduate School of Science, Department of Biological Sciences, Graduate School of Science , Department of Biological Sciences, Graduate School of Science, Department of Biological Sciences, Graduate School of Science
Contributors

OMERO Dataset
OMERO Project
Source