Detail of Fig5D_BOR1_SCLIM



Project
SSBD:Repository
Title
Z-series images of BOR1-GFP, AP1M2-TagRFP and AP4M-iRFP in Arabidopsis root obtained by SCLIM
Description
Z-series images of BOR1(borate transporter)-GFP, AP1M2-TagRFP and AP4M-iRFP in Arabidopsis root obtained by SCLIM (super-resolution confocal live-imaging microscopy). The images are also included that were processed using deconvolution algorithms with theoretical point-spread functions in Volocity software.
Release, Updated
2025-11-28
License
CC BY 4.0
Kind
Image data
File Formats
.tif
Data size
111.3 MB

Organism
Arabidopsis thaliana ( NCBI:txid3702 )
Strain(s)
Col-0
Cell Line
-

Datatype
-
Molecular Function (MF)
active borate transmembrane transporter activity
Biological Process (BP)
vesicle-mediated transport intracellular borate homeostasis
Cellular Component (CC)
vesicle membrane plasma membrane vacuole
Biological Imaging Method
confocal microscopy ( Fbbi:00000251 )
X scale
-
Y scale
-
Z scale
-
T scale
-

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Summary of Methods
Yoshinari A, Shimizu Y, Hosokawa T, Nakano A, Uemura T, Takano J. Rapid Vacuolar Sorting of the Borate Transporter BOR1 Requires the Adaptor Protein Complex AP-4 in Arabidopsis. Plant Cell Physiol. 2024 Dec 6;65(11):1801-1811.
Related paper(s)

Akira Yoshinari, Yutaro Shimizu, Takuya Hosokawa, Akihiko Nakano, Tomohiro Uemura, Junpei Takano (2024) Rapid Vacuolar Sorting of the Borate Transporter BOR1 Requires the Adaptor Protein Complex AP-4 in Arabidopsis., Plant & cell physiology

Published in 2024 Aug 31 (Electronic publication in Aug. 31, 2024, midnight )

(Abstract) Plants maintain nutrient homeostasis by controlling the activities and abundance of nutrient transporters. In Arabidopsis thaliana, the borate (B) transporter BOR1 plays a role in the efficient translocation of B under low-B conditions. BOR1 undergoes polyubiquitination in the presence of sufficient B and is then transported to the vacuole via multivesicular bodies (MVBs) to prevent B accumulation in tissues at a toxic level. A previous study indicated that BOR1 physically interacts with micro subunits of adaptor protein complexes AP-3 and AP-4, both involved in vacuolar sorting pathways. In this study, we investigated the roles of AP-3 and AP-4 subunits in BOR1 trafficking in Arabidopsis. The lack of AP-3 subunits did not affect either vacuolar sorting or polar localization of BOR1-GFP, whereas the absence of AP-4 subunits resulted in a delay in high-B-induced vacuolar sorting without affecting polar localization. Super-resolution microscopy revealed a rapid sorting of BOR1-GFP into AP-4-positive spots in the trans-Golgi network (TGN) upon high-B supply. These results indicate that AP-4 is involved in sequestration of ubiquitinated BOR1 into a TGN-specific subdomain "vacuolar-trafficking zone," and is required for efficient sorting to MVB and vacuole. Our findings elucidate the rapid vacuolar sorting process facilitated by AP-4 in plant nutrient transporters.

Contact
Junpei Takano , Osaka Prefecture University , Graduate School of Life and Environmental Sciences , Graduate School of Life and Environmental Sciences
Contributors

OMERO Dataset
OMERO Project
Source