Detail of Fig5_Brain_4fold
Project
SSBD:Repository
Title
Z-series images of mouse brain stained with SYTOX-Green
Description
Z-series SYTOX-Green images of mouse brain obtained by AMATERAS2. The colonally cutted 1.5 mm brain section was chemically cleared using CUBIC, and the cell nuclei were stained with SYTOX-Green. The images were obtained with 4x magnification system, and the background intensity was removed by the computational sectioning.
Release, Updated
2025-11-26
License
CC BY
Kind
Image data
File Formats
.tif
Data size
44.3 GB
Datatype
-
Molecular Function (MF)
Biological Process (BP)
Cellular Component (CC)
nucleus
Biological Imaging Method
X scale
0.55 micrometer
Y scale
0.55 micrometer
Z scale
4 micrometer
T scale
-
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
Ichimura T, Kakizuka T, Taniguchi Y, Ejima S, Sato Y, Itano K, Seiriki K, Hashimoto H, Sugawara K, Itoga H, Onami S, Nagai T. Volumetric trans-scale imaging of massive quantity of heterogeneous cell populations in centimeter-wide tissue and embryo. Elife. 2025 Feb 3;13:RP93633
Related paper(s)
Contact
Taro Ichimura, Takeharu Nagai
, Osaka University, Osaka University
, Institute for Open and Transdisciplinary Research Initiatives, Institute for Open and Transdisciplinary Research Initiatives
, Institute for Open and Transdisciplinary Research Initiatives, Institute for Open and Transdisciplinary Research Initiatives
Contributors
Taishi Kakizuka, Yoshitsugu Taniguchi, Satoshi Ejima, Yuki Sato, Kaoru Seiriki, Hitoshi Hashimoto
OMERO Project