Detail of Fig2c_DNAunderwind


Project
SSBD:Repository
Title
Z-series Lattice-SIM images of DAPI, bio-psoralen and TOPI in a nucleus
Description
Z-series Lattice-SIM images of DAPI, bio-psoralen and TOPI in a nucleus. The underwound DNA was labeled with biotinylated psoralen, which preferentially binds to underwound DNA rather than relaxed DNA, before cell fixation. Channel1;TOPI (topoisomerase I (TopI), which is involved in the relaxation of under/over-wound DNA) , Chennel2;DAPI, Channel3;psoralen
Release, Updated
2025-01-31
License
CC BY
Kind
Image data
File Formats
.czi
Data size
60.2 MB

Organism
Mus musculus ( NCBI:txid10090 )
Strain(s)
-
Cell Line
MC3T3-E1 cell

Datatype
-
Molecular Function (MF)
Biological Process (BP)
Cellular Component (CC)
nucleus
Biological Imaging Method
Lattice-pattern structured illumination microscopy
X scale
0.05 micrometer
Y scale
0.05 micrometer
Z scale
0.44 micrometer
T scale
-

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Summary of Methods
Fukute J, Maki K, Adachi T. The nucleolar shell provides anchoring sites for DNA untwisting. Commun Biol. 2024 Jan 23;7(1):83.
Related paper(s)

Contact
Koichiro Maki , Kyoto University , Laboratory of Cellular and Molecular Biomechanics, Department of Mammalian Regulatory Network, Graduate School of Biostudies , Laboratory of Cellular and Molecular Biomechanics, Department of Mammalian Regulatory Network, Graduate School of Biostudies
Contributors
Jumpei Fukute, Koichiro Maki, Taiji Adachi

OMERO Dataset
OMERO Project
Source