SSBD:database

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Detail of ImageProcessingResult_D1BN_TM9.5_L

Project

SSBD:Repository

Title

BDML file for segmentation results of brain contours and tagged neurons for all images of P7 mouse brains (D1BN_TM9.5_L dataset) that was neurogenic-tagged at E9.5 and was visualied for nucleus-localized beta-galactosidase reporter (L)

Description

segmentation results of brain contours and tagged neurons for all images of P7 mouse brains (D1BN_TM9.5_L dataset) that was neurogenic-tagged at E9.5 and was visualied for nucleus-localized beta-galactosidase reporter (L)

Release, Updated

2023-05-09,
2023-05-29

Errata in Project

2023/05/29 All BDML/BD5 data was updated cause of some format error in BD5

License

CC BY

Kind

Quantitative data based on Experiment , related Image data - D1BN_TM9.5_L

File Formats

BDML/BD5

Data size

95.1 MB

Organism

Mus musculus ( NCBI:txid10090 )

Strain(s)

C57BL/6 Neurod1^{CreER}(D1B); Tau^{mGFP-nLacZ}

Cell Line

Datatype

Molecular Function (MF)

Biological Process (BP)

nervous system development ( GO:0007399 )

Cellular Component (CC)

plasma membrane ( GO:0005886 ) , neuron projection ( GO:0043005 )

Biological Imaging Method

bright-field microscopy ( Fbbi:00000243 )
chemically fixed tissue ( Fbbi:00000002 )
cryostat-sectioned tissue ( Fbbi:00000027 )
horseradish peroxidase ( Fbbi:00000138 )

X scale

1.0 micrometer/pixel

Y scale

1.0 micrometer/pixel

Z scale

20 micrometer/slice

T scale

Image Acquisition

Experiment type

Microscope type

Acquisition mode

Contrast method

Microscope model

Detector model

Objective model

Filter set

Summary of Methods

See details in Kawabata H, et. al. (2023) ICBET2023