Summary of 72-Kyogoku-CytoplasmNucDyn
SSBD:OMERO.gallery Project
SSBD:OMERO Project
SSBD:downloads
Title
Timelapse images and BDML file for quantitative information about the cytoplasmic size affecting nuclear dynamics during mouse oocytes meiosis
Kind
Image data
based on Experiment
Number of Datasets
453
( Image datasets: 453,
Quantitative data datasets: 0 )
Size of Datasets
6.7 TB
( Image datasets: 6.7 TB,
Quantitative data datasets: 0 bytes )
Gene symbol(s)
C-Mad2, Hec-1, Hec1
Protein name(s)
ACA, Aurora B/C, CENP-C, CENP-E, H2B, MCAK, Securin
Protein tag(s)
2mNeonGreen, EGFP, mCherry, mNeonGreen, mNeonGreen. mCherry
Molecular Function (MF)
-
Biological Process (BP)
cytoplasm organization, nuclear envelope breakdown, mitotic cell cycle
Cellular Component (CC)
chromosome, kinetochore microtubule
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0527153 micrometer/pixel, 0.1037832 micrometer/pixel, 0.1037832 micrometer/pixel, 0.0922518 micrometer/pixel, 0.2075665 micrometer/pixel, 0.0691888 micrometer/pixel, 0.4151329 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0638666 micrometer/pixel, 0.0593047 micrometer/pixel, 0.1383776 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0830266 micrometer/pixel
Y scale
0.0527153 micrometer/pixel, 0.1037832 micrometer/pixel, 0.1037832 micrometer/pixel, 0.0922518 micrometer/pixel, 0.2075665 micrometer/pixel, 0.0691888 micrometer/pixel, 0.4151329 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0638666 micrometer/pixel, 0.0593047 micrometer/pixel, 0.1383776 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0830266 micrometer/pixel
Z scale
1 micrometer/slice, 4 micrometer/slice, 0.3791020 micrometer/slice, 0.5 micrometer/slice, 0.3125801 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, 3 minutes for each time interval, 6 minutes for each time interval, NA, 5 minutes for each time interval, 1 minute for each time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Hirohisa Kyogoku, Tomoya S Kitajima (2017) Large Cytoplasm Is Linked to the Error-Prone Nature of Oocytes., Developmental cell, Volume 41, Number 3, pp. 287-298.e4
Published in 2017 May 8
(Abstract) Chromosome segregation during meiosis in oocytes is error prone. The uniquely large cytoplasmic size of oocytes, which provides support for embryogenesis after fertilization, might be a predisposing factor for meiotic errors. However, this hypothesis remains unproven. Here, we show that cytoplasmic size affects the functionality of the acentrosomal spindle. Artificially decreasing the cytoplasmic size in mouse oocytes allows the acentrosomal spindle poles to have a better-focused distribution of microtubule-organizing centers and to biorient chromosomes more efficiently, whereas enlargement of the cytoplasmic size has the opposite effects. Moreover, we found that the cytoplasmic size-dependent dilution of nuclear factors, including anaphase inhibitors that are preformed at the nuclear membrane, limits the spindle's capacity to prevent anaphase entry with misaligned chromosomes. The present study defines a large cytoplasmic volume as a cell-intrinsic feature linked to the error-prone nature of oocytes. This may represent a trade-off between meiotic fidelity and post-fertilization developmental competence.
(MeSH Terms)
Contact
Tomoya S. Kitajima
, RIKEN
, Center for Biosystems Dynamics Research
, Laboratory for Chromosome Segregation
Dataset List of 72-Kyogoku-CytoplasmNucDyn
Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail
Dataset Kind
Image data
Dataset Size
243.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (174.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
202.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (142.5 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
205.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (145.3 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
202.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (143.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
243.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (174.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
202.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (145.7 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
111.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (67.1 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
147.5 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (84.6 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
164.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (92.7 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
130.7 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (74.3 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
50.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (24.9 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
62.6 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (33.0 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
60.0 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (31.5 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
179.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (125.8 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
178.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (123.0 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
17.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (8.4 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
17.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (8.3 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
43.6 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (23.6 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
26.5 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (16.4 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
68.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (40.4 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
68.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (41.6 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
77.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (43.2 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
40.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (22.4 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
85.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (42.4 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
85.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (43.7 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
63.7 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (32.1 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
107.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (55.0 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.0 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (244.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
357.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (84.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (270.0 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
117.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (60.7 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
110.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (55.6 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
127.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.4 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
127.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.6 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
127.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.3 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
127.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (64.4 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (45.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (42.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (45.6 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (42.9 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
725.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (23.5 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.1 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (47.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.3 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (48.6 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (42.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
900.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (33.2 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (50.3 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
1.2 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (48.1 MB)
Thumbnail
Dataset Kind
Image data
Dataset Size
70.8 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (33.9 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
70.8 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (33.4 GB)
Thumbnail
Dataset Kind
Image data
Dataset Size
118.7 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (55.6 GB)