Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_20
# 1629
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_21
# 1630
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_22
# 1631
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_23
# 1632
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_24
# 1633
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_25
# 1634
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_26
# 1635
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_27
# 1636
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_28
# 1637
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_29
# 1638
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_30
# 1639
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_31
# 1640
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_32
# 1641
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_33
# 1642
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_34
# 1643
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_35
# 1644
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_36
# 1645
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_37
# 1646
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_38
# 1647
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_39
# 1648
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_40
# 1649
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_41
# 1650
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_42
# 1651
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_43
# 1652
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_44
# 1653
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_45
# 1654
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_46
# 1655
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_47
# 1656
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_48
# 1657
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_49
# 1658
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_50
# 1659
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_51
# 1660
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_52
# 1661
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_53
# 1662
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_54
# 1663
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_55
# 1664
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_56
# 1665
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_57
# 1666
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_58
# 1667
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_59
# 1668
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_60
# 1669
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_61
# 1670
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_62
# 1671
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_63
# 1672
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_64
# 1673
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_65
# 1674
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_66
# 1675
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_67
# 1676
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_68
# 1677
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_69
# 1678
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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