SSBD - SSBD:database - 57-Herawati-CellDyn

Summary of 57-Herawati-CellDyn

SSBD:database

57-Herawati-CellDyn

SSBD:database URL

https://ssbd.riken.jp/database/57-Herawati-CellDyn/

SSBD:repository

ssbd-repos-000057

SSBD:repository URL

https://ssbd.riken.jp/repository/57/

Title

Images and quantitative data showing the self-organizing mechanism in mouse multiciliated cells (MCCs)

Description

Release date

2018-11-14

Updated date

2020-02-03

License

CC BY

Kind

Image data, Quantitative data based on Experiment

Number of Datasets

24 ( Image datasets: 23, Quantitative data datasets: 1 )

Size of Datasets

2.4 GB ( Image datasets: 2.4 GB, Quantitative data datasets: 971.8 KB )

Organism(s)

Mus musculus

Gene symbol(s)

Odf2

Protein name(s)

centrin2

Protein tag(s)

GFP

Reporter(s)

anti-keratin 8 mAb

Datatype

epithelial cells dynamics

Molecular Function (MF)

Biological Process (BP)

Cellular Component (CC)

cytoskeleton

Biological Imaging Method

XYZ Scale

XY: NA, Z: NA, XY: 0.07 micrometer/pixel, Z: 0.07 micrometer/slice

T scale

Image Acquisition

Experiment type

Immunofluorescence

Microscope type

ConfocalMicroscope

Acquisition mode

SpinningDiskConfocal

Contrast method

Fluorescence

Microscope model

Olympus SD-OSR

Detector model

ORCA-Flash 4.0 v2; Hamamatsu Photonics

Objective model

Olympus UPlanSApo 60x Sil, ,NA 1.3; 1.6x conversion

Filter set

DAPI/FITC/TRITC

Dataset List of 57-Herawati-CellDyn

Thumbnail

Dataset ID

Kind

Size

4D View

SSBD:OMERO

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Thumbnail

# 1354

Datast ID fig1_metecALI21_ZO1

Dataset Kind Image data

Dataset Size 14.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1355

Datast ID fig1_metecALI21_centrinGFP

Dataset Kind Image data

Dataset Size 14.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1356

Datast ID fig3_cent-odf2-ZO1_mtecALI9

Dataset Kind Image data

Dataset Size 42.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1357

Datast ID fig3_cent-odf2-ZO1_mtecALI10

Dataset Kind Image data

Dataset Size 48.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1358

Datast ID fig3_cent-odf2-ZO1_mtecALI11

Dataset Kind Image data

Dataset Size 10.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1359

Datast ID fig3_odf2-alphatub-centriolin_mtecALi4

Dataset Kind Image data

Dataset Size 51.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1360

Datast ID fig5_centrin-centriolin-vangl1_control

Dataset Kind Image data

Dataset Size 3.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1361

Datast ID fig5_centrin-centriolin-vangl1_Noc

Dataset Kind Image data

Dataset Size 3.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1362

Datast ID fig5_krt8-odf2-ZO1-control

Dataset Kind Image data

Dataset Size 144.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1363

Datast ID fig5_krt8-odf2-ZO1-Noc3h

Dataset Kind Image data

Dataset Size 84.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1364

Datast ID fig6_centrinGFP_Odf2KO

Dataset Kind Image data

Dataset Size 2.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1365

Datast ID fig6_centrinGFP_Odf2WT

Dataset Kind Image data

Dataset Size 2.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1366

Datast ID Supp1_afterlive

Dataset Kind Image data

Dataset Size 604.3 MB

4D view

SSBD:OMERO

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Thumbnail

# 1367

Datast ID Supp1_liveimaging_pos5

Dataset Kind Image data

Dataset Size 20.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1368

Datast ID Supp1_normal_incubation

Dataset Kind Image data

Dataset Size 604.3 MB

4D view

SSBD:OMERO

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Thumbnail

# 1369

Datast ID Supp2_Pos103_part1

Dataset Kind Image data

Dataset Size 98.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1370

Datast ID Supp2_Pos103_part2

Dataset Kind Image data

Dataset Size 96.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1371

Datast ID Supp2_wholePos563_6fps

Dataset Kind Image data

Dataset Size 223.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1372

Datast ID Supp3_Pos563-frame1_105

Dataset Kind Image data

Dataset Size 206.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1373

Datast ID Supp8_Nos_Pos7_early

Dataset Kind Image data

Dataset Size 6.4 MB

4D view

SSBD:OMERO

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Thumbnail

# 1374

Datast ID Supp8_ALI6-Odf2KO_Pos22

Dataset Kind Image data

Dataset Size 116.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1375

Datast ID Supp8_mtecALIA6_Nos_Pos1

Dataset Kind Image data

Dataset Size 108.0 MB

4D view

SSBD:OMERO

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Thumbnail

# 1376

Datast ID Supp8_Nos_Pos7_late

Dataset Kind Image data

Dataset Size 6.4 MB

4D view

SSBD:OMERO

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Thumbnail -

# 1377

Datast ID Figure2A_BB_position_tracking

Dataset Kind Quantitative data

Dataset Size 485.9 KB

4D view

SSBD:OMERO

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