Summary of 57-Herawati-CellDyn


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SSBD:database URL

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SSBD:repository URL

Title
Images and quantitative data showing the self-organizing mechanism in mouse multiciliated cells (MCCs)
Description
-
Release date
2018-11-14
Updated date
2020-02-03
License
CC BY
Kind
Image data, Quantitative data based on Experiment
Number of Datasets
24 ( Image datasets: 23, Quantitative data datasets: 1 )
Size of Datasets
2.4 GB ( Image datasets: 2.4 GB, Quantitative data datasets: 971.8 KB )

Organism(s)
Mus musculus
Gene symbol(s)
Odf2
Protein name(s)
centrin2
Protein tag(s)
GFP
Reporter(s)
anti-keratin 8 mAb

Datatype
epithelial cells dynamics
Molecular Function (MF)
Biological Process (BP)
-
Cellular Component (CC)
cytoskeleton
Biological Imaging Method
-
XYZ Scale
XY: NA, Z: NA, XY: 0.07 micrometer/pixel, Z: 0.07 micrometer/slice
T scale
-

Image Acquisition
Experiment type
Immunofluorescence
Microscope type
ConfocalMicroscope
Acquisition mode
SpinningDiskConfocal
Contrast method
Fluorescence
Microscope model
Olympus SD-OSR
Detector model
ORCA-Flash 4.0 v2; Hamamatsu Photonics
Objective model
Olympus UPlanSApo 60x Sil, ,NA 1.3; 1.6x conversion
Filter set
DAPI/FITC/TRITC

Related paper(s)

Elisa Herawati, Daisuke Taniguchi, Hatsuho Kanoh, Kazuhiro Tateishi, Shuji Ishihara, Sachiko Tsukita (2016) Multiciliated cell basal bodies align in stereotypical patterns coordinated by the apical cytoskeleton., The Journal of cell biology, Volume 214, Number 5, pp. 571-86

Published in 2016 Aug 29

(Abstract) Multiciliated cells (MCCs) promote fluid flow through coordinated ciliary beating, which requires properly organized basal bodies (BBs). Airway MCCs have large numbers of BBs, which are uniformly oriented and, as we show here, align linearly. The mechanism for BB alignment is unexplored. To study this mechanism, we developed a long-term and high-resolution live-imaging system and used it to observe green fluorescent protein-centrin2-labeled BBs in cultured mouse tracheal MCCs. During MCC differentiation, the BB array adopted four stereotypical patterns, from a clustering "floret" pattern to the linear "alignment." This alignment process was correlated with BB orientations, revealed by double immunostaining for BBs and their asymmetrically associated basal feet (BF). The BB alignment was disrupted by disturbing apical microtubules with nocodazole and by a BF-depleting Odf2 mutation. We constructed a theoretical model, which indicated that the apical cytoskeleton, acting like a viscoelastic fluid, provides a self-organizing mechanism in tracheal MCCs to align BBs linearly for mucociliary transport.
(MeSH Terms)

Contact
Sachiko Tsukita, Shuji Ishihara , Osaka University , Graduate School of Frontier Biosciences and Medicine , Laboratory of Biological Science
Contributors
Elisa Herawati, Daisuke Taniguchi, Hatsuho Kanoh, Kazuhiro Tateishi, Shuji Ishihara, Sachiko Tsukita

Dataset List of 57-Herawati-CellDyn

Thumbnail
#
Dataset ID
Kind
Size
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SSBD:OMERO
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Thumbnail Thumbnail for dataset fig1_metecALI21_ZO1
# 1354
Dataset Kind Image data
Dataset Size 14.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig1_metecALI21_centrinGFP
# 1355
Dataset Kind Image data
Dataset Size 14.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig3_cent-odf2-ZO1_mtecALI9
# 1356
Dataset Kind Image data
Dataset Size 42.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig3_cent-odf2-ZO1_mtecALI10
# 1357
Dataset Kind Image data
Dataset Size 48.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig3_cent-odf2-ZO1_mtecALI11
# 1358
Dataset Kind Image data
Dataset Size 10.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset fig3_odf2-alphatub-centriolin_mtecALi4
# 1359
Dataset Kind Image data
Dataset Size 51.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig5_centrin-centriolin-vangl1_control
# 1360
Dataset Kind Image data
Dataset Size 3.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig5_centrin-centriolin-vangl1_Noc
# 1361
Dataset Kind Image data
Dataset Size 3.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset fig5_krt8-odf2-ZO1-control
# 1362
Dataset Kind Image data
Dataset Size 144.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig5_krt8-odf2-ZO1-Noc3h
# 1363
Dataset Kind Image data
Dataset Size 84.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig6_centrinGFP_Odf2KO
# 1364
Dataset Kind Image data
Dataset Size 2.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset fig6_centrinGFP_Odf2WT
# 1365
Dataset Kind Image data
Dataset Size 2.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp1_afterlive
# 1366
Datast ID Supp1_afterlive
Dataset Kind Image data
Dataset Size 604.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp1_liveimaging_pos5
# 1367
Dataset Kind Image data
Dataset Size 20.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp1_normal_incubation
# 1368
Dataset Kind Image data
Dataset Size 604.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp2_Pos103_part1
# 1369
Datast ID Supp2_Pos103_part1
Dataset Kind Image data
Dataset Size 98.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp2_Pos103_part2
# 1370
Datast ID Supp2_Pos103_part2
Dataset Kind Image data
Dataset Size 96.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp2_wholePos563_6fps
# 1371
Dataset Kind Image data
Dataset Size 223.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp3_Pos563-frame1_105
# 1372
Dataset Kind Image data
Dataset Size 206.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp8_Nos_Pos7_early
# 1373
Dataset Kind Image data
Dataset Size 6.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp8_ALI6-Odf2KO_Pos22
# 1374
Dataset Kind Image data
Dataset Size 116.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp8_mtecALIA6_Nos_Pos1
# 1375
Dataset Kind Image data
Dataset Size 108.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Supp8_Nos_Pos7_late
# 1376
Dataset Kind Image data
Dataset Size 6.4 MB
4D view
SSBD:OMERO
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Thumbnail -
# 1377
Dataset Kind Quantitative data
Dataset Size 485.9 KB
4D view
SSBD:OMERO
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