Summary of 368-Yabushita-Decitabine

SSBD:database
SSBD:database URL
Title
Time-lapse images of MDS-derived AML cell lines treated with decitabine
Description
-
Release date
2025-04-10
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
22 ( Image datasets: 22, Quantitative data datasets: 0 )
Size of Datasets
26.6 GB ( Image datasets: 26.6 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Homo sapiens
Cell lines(s)
HL-60, MDS-L-2007 (a human secondery myeloid leukemia cell line derived from an MDS (myelodysplastic syndrome) cell line, MDS-92)

Datatype
-
Molecular Function (MF)
Biological Process (BP)
cell cycle, cell division
Cellular Component (CC)
Biological Imaging Method
confocal microscopy
X scale
0.325 micrometer/pixel
Y scale
0.325 micrometer/pixel
Z scale
-
T scale
5 minutes

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Tomohiro Yabushita, Takumi Chinen, Atsuya Nishiyama, Shuhei Asada, Ruka Shimura, Tomoya Isobe, Keita Yamamoto, Naru Sato, Yutaka Enomoto, Yosuke Tanaka, Tomofusa Fukuyama, Hitoshi Satoh, Keiko Kato, Kaori Saitoh, Takamasa Ishikawa, Tomoyoshi Soga, Yasuhito Nannya, Tatsuo Fukagawa, Makoto Nakanishi, Daiju Kitagawa, Toshio Kitamura, Susumu Goyama (2023) Mitotic perturbation is a key mechanism of action of decitabine in myeloid tumor treatment., Cell reports, pp. 113098

Published in 2023 Sep 12 (Electronic publication in Sept. 12, 2023, midnight )

(Abstract) Decitabine (DAC) is clinically used to treat myelodysplastic syndrome (MDS) and acute myeloid leukemia (AML). Our genome-wide CRISPR-dCas9 activation screen using MDS-derived AML cells indicates that mitotic regulation is critical for DAC resistance. DAC strongly induces abnormal mitosis (abscission failure or tripolar mitosis) in human myeloid tumors at clinical concentrations, especially in those with TP53 mutations or antecedent hematological disorders. This DAC-induced mitotic disruption and apoptosis are significantly attenuated in DNMT1-depleted cells. In contrast, overexpression of Dnmt1, but not the catalytically inactive mutant, enhances DAC-induced mitotic defects in myeloid tumors. We also demonstrate that DAC-induced mitotic disruption is enhanced by pharmacological inhibition of the ATR-CLSPN-CHK1 pathway. These data challenge the current assumption that DAC inhibits leukemogenesis through DNMT1 inhibition and subsequent DNA hypomethylation and highlight the potent activity of DAC to disrupt mitosis through aberrant DNMT1-DNA covalent bonds.

Contact
Susumu Goyama , The University of Tokyo , Division of Molecular Oncology, Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences , Division of Molecular Oncology, Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences
Contributors
Tomohiro Yabushita, Takumi Chinen


Dataset List of 368-Yabushita-Decitabine

#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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# 12629
Datast ID Fig2_MDS_DMSO_1
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12630
Datast ID Fig2_MDS_DMSO_2
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12631
Datast ID Fig2_MDS_DMSO_3
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12632
Datast ID Fig2_MDS_DAC0.25_1
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12633
Datast ID Fig2_MDS_DAC0.25_2
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12634
Datast ID Fig2_MDS_DAC0.25_3
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12635
Datast ID Fig2_MDS_DAC0.5_1
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12636
Datast ID Fig2_MDS_DAC0.5_2
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12637
Datast ID Fig2_MDS_DAC0.5_3
Dataset Kind Image data
Dataset Size 949.3 MB
4D view
SSBD:OMERO
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# 12638
Datast ID Fig6_HL-60_DMSO_1
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12639
Datast ID Fig6_HL-60_DMSO_2
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12640
Datast ID Fig6_HL-60_DMSO_3
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12641
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12642
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12643
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12644
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12645
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12646
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12647
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12648
Datast ID Fig6_HL-60_Cera_1
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12649
Datast ID Fig6_HL-60_Cera_2
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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# 12650
Datast ID Fig6_HL-60_Cera_3
Dataset Kind Image data
Dataset Size 1.4 GB
4D view
SSBD:OMERO
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