SSBD:database

Thumbnail for 225-Seiriki-WholeBrainDev

Summary of 225-Seiriki-WholeBrainDev

SSBD:database
225-Seiriki-WholeBrainDev
SSBD:database URL
https://ssbd.riken.jp/database/225-Seiriki-WholeBrainDev/
SSBD:repository
ssbd-repos-000225
SSBD:repository URL
https://ssbd.riken.jp/repository/225/
Title
Whole-brain imaging of mouse using block-face serial microscopy tomography (FAST).
Description
-
Release date
2022-11-23
Updated date
-
License
CC BY-NC-SA
Kind
Image data based on Experiment
Number of Datasets
415 ( Image datasets: 415, Quantitative data datasets: 0 )
Size of Datasets
3.2 TB ( Image datasets: 3.2 TB, Quantitative data datasets: 0 bytes )
Organism(s)
Mus musculus
Protein tag(s)
dyes
Datatype
-
Molecular Function (MF)
Biological Process (BP)
brain development
Cellular Component (CC)
Biological Imaging Method
whole-brain imaging, block-face serial microscopy tomography (FAST), fluorescence microscopy
X scale
0.7 micrometer/pixel, 1.0 micrometer/pixel
Y scale
0.7 micrometer/pixel, 1.0 micrometer/pixel
Z scale
5 micrometer/pixel
T scale
-
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Atsushi Kasai, Hitoshi Hashimoto , Osaka University, Osaka University , Graduate School of Pharmaceutical Sciences , Graduate School of Pharmaceutical Sciences , Laboratory of Molecular Neuropharmacology , Laboratory of Molecular Neuropharmacology
Contributors

Dataset List of 225-Seiriki-WholeBrainDev

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging_20180410_224310
# 7793
Datast ID Fig5_Whole_brain_imaging_20180410_224310
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging1_20180410_224543
# 7794
Datast ID Fig5_Whole_brain_imaging1_20180410_224543
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging2_20180410_224809
# 7795
Datast ID Fig5_Whole_brain_imaging2_20180410_224809
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging3_20180410_225036
# 7796
Datast ID Fig5_Whole_brain_imaging3_20180410_225036
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging4_20180410_225304
# 7797
Datast ID Fig5_Whole_brain_imaging4_20180410_225304
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging5_20180410_225532
# 7798
Datast ID Fig5_Whole_brain_imaging5_20180410_225532
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging6_20180410_225759
# 7799
Datast ID Fig5_Whole_brain_imaging6_20180410_225759
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging7_20180410_230027
# 7800
Datast ID Fig5_Whole_brain_imaging7_20180410_230027
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging8_20180410_230255
# 7801
Datast ID Fig5_Whole_brain_imaging8_20180410_230255
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Download Image data
Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging9_20180410_230521
# 7802
Datast ID Fig5_Whole_brain_imaging9_20180410_230521
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging10_20180410_230749
# 7803
Datast ID Fig5_Whole_brain_imaging10_20180410_230749
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging11_20180410_231016
# 7804
Datast ID Fig5_Whole_brain_imaging11_20180410_231016
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging12_20180410_231243
# 7805
Datast ID Fig5_Whole_brain_imaging12_20180410_231243
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging13_20180410_231512
# 7806
Datast ID Fig5_Whole_brain_imaging13_20180410_231512
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging14_20180410_231806
# 7807
Datast ID Fig5_Whole_brain_imaging14_20180410_231806
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging15_20180410_232100
# 7808
Datast ID Fig5_Whole_brain_imaging15_20180410_232100
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging16_20180410_232356
# 7809
Datast ID Fig5_Whole_brain_imaging16_20180410_232356
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data
Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging17_20180410_232652
# 7810
Datast ID Fig5_Whole_brain_imaging17_20180410_232652
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging18_20180410_232950
# 7811
Datast ID Fig5_Whole_brain_imaging18_20180410_232950
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging19_20180410_233246
# 7812
Datast ID Fig5_Whole_brain_imaging19_20180410_233246
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging20_20180410_233543
# 7813
Datast ID Fig5_Whole_brain_imaging20_20180410_233543
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging21_20180410_233840
# 7814
Datast ID Fig5_Whole_brain_imaging21_20180410_233840
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging22_20180410_234138
# 7815
Datast ID Fig5_Whole_brain_imaging22_20180410_234138
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging23_20180410_234435
# 7816
Datast ID Fig5_Whole_brain_imaging23_20180410_234435
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging24_20180410_234732
# 7817
Datast ID Fig5_Whole_brain_imaging24_20180410_234732
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging25_20180410_235030
# 7818
Datast ID Fig5_Whole_brain_imaging25_20180410_235030
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging26_20180410_235328
# 7819
Datast ID Fig5_Whole_brain_imaging26_20180410_235328
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging27_20180410_235626
# 7820
Datast ID Fig5_Whole_brain_imaging27_20180410_235626
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging28_20180410_235925
# 7821
Datast ID Fig5_Whole_brain_imaging28_20180410_235925
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging29_20180411_00223
# 7822
Datast ID Fig5_Whole_brain_imaging29_20180411_00223
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging30_20180411_00522
# 7823
Datast ID Fig5_Whole_brain_imaging30_20180411_00522
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging31_20180411_00821
# 7824
Datast ID Fig5_Whole_brain_imaging31_20180411_00821
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging32_20180411_01120
# 7825
Datast ID Fig5_Whole_brain_imaging32_20180411_01120
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging33_20180411_01420
# 7826
Datast ID Fig5_Whole_brain_imaging33_20180411_01420
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging34_20180411_01719
# 7827
Datast ID Fig5_Whole_brain_imaging34_20180411_01719
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging35_20180411_02018
# 7828
Datast ID Fig5_Whole_brain_imaging35_20180411_02018
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging36_20180411_02316
# 7829
Datast ID Fig5_Whole_brain_imaging36_20180411_02316
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging37_20180411_02615
# 7830
Datast ID Fig5_Whole_brain_imaging37_20180411_02615
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging38_20180411_02914
# 7831
Datast ID Fig5_Whole_brain_imaging38_20180411_02914
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging39_20180411_03214
# 7832
Datast ID Fig5_Whole_brain_imaging39_20180411_03214
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging40_20180411_03511
# 7833
Datast ID Fig5_Whole_brain_imaging40_20180411_03511
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging41_20180411_03812
# 7834
Datast ID Fig5_Whole_brain_imaging41_20180411_03812
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging42_20180411_04112
# 7835
Datast ID Fig5_Whole_brain_imaging42_20180411_04112
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging43_20180411_04412
# 7836
Datast ID Fig5_Whole_brain_imaging43_20180411_04412
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging44_20180411_04713
# 7837
Datast ID Fig5_Whole_brain_imaging44_20180411_04713
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging45_20180411_05012
# 7838
Datast ID Fig5_Whole_brain_imaging45_20180411_05012
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging46_20180411_05313
# 7839
Datast ID Fig5_Whole_brain_imaging46_20180411_05313
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging47_20180411_05613
# 7840
Datast ID Fig5_Whole_brain_imaging47_20180411_05613
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging48_20180411_05913
# 7841
Datast ID Fig5_Whole_brain_imaging48_20180411_05913
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5_Whole_brain_imaging49_20180411_10213
# 7842
Datast ID Fig5_Whole_brain_imaging49_20180411_10213
Dataset Kind Image data
Dataset Size 7.9 GB
4D view
SSBD:OMERO
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