Summary of 130-Sano-CellMigrationDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse FRET images data and BDML file for quantitative data about the cell migration in epidermis or urothelial of transgenic mice
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
26 ( Image datasets: 26, Quantitative data datasets: 0 )
Size of Datasets
4.5 GB ( Image datasets: 4.5 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
cell migration, activation of MAPERK kinase
Cellular Component (CC)
nucleus
Biological Imaging Method
time lapse microscopy
X scale
0.71 micrometer/pixel, 0.621 micrometer/pixel, 0.414 micrometer/pixel, 0.776 micrometer/pixel, 0.552 micrometer/pixel, 828 micrometer/pixel
Y scale
0.71 micrometer/pixel, 0.621 micrometer/pixel, 0.414 micrometer/pixel, 0.776 micrometer/pixel, 0.552 micrometer/pixel, 828 micrometer/pixel
Z scale
1 micrometer/slice, NA, 0.5 micrometer/slice
T scale
180 second for each time interval, 10 minites for each time interval, 360 second for each time interval, NA, 120 second for each time interval

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Takeshi Sano, Takashi Kobayashi, Osamu Ogawa, Michiyuki Matsuda (2018) Gliding Basal Cell Migration of the Urothelium during Wound Healing., The American journal of pathology, Volume 188, Number 11, pp. 2564-2573

Published in 2018 Nov (Electronic publication in Aug. 16, 2018, midnight )

(Abstract) Collective cell migration during wound healing has been extensively studied in the epidermis. However, it remains unknown whether the urothelium repairs wounds in a manner similar to the epidermis. By in vivo two-photon excitation microscopy of transgenic mice that express fluorescent biosensors, we studied the collective cell migration of the urothelium in comparison with that of the epidermis. In vivo time-lapse imaging revealed that, even in the absence of a wound, urothelial cells continuously moved and sometimes glided as a sheet over the underlying lamina propria. On abrasion of the epithelium, the migration speed of each epidermal cell was inversely correlated with the distance to the wound edge. Repetitive activation waves of extracellular signal-regulated kinase (ERK) were generated at and propagated away from the wound edge. In contrast, urothelial cells glided as a sheet over the lamina propria without any ERK activation waves. Accordingly, the mitogen-activated protein kinase/ERK kinase inhibitor PD0325901 decreased the migration velocity of the epidermis but not the urothelium. Interestingly, the tyrosine kinase inhibitor dasatinib inhibited migration of the urothelium as well as the epidermis, suggesting that the gliding migration of the urothelium is an active, not a passive, migration. In conclusion, the urothelium glides over the lamina propria to fill wounds in an ERK-independent manner, whereas the epidermis crawls to cover wounds in an ERK-dependent manner.
(MeSH Terms)

Contact
Michiyuki Matsuda , Kyoto University , Graduate School of Biostudies , Laboratory of Bioimaging and Cell Signaling
Contributors

Dataset List of 130-Sano-CellMigrationDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Figure1A_EKAREV-NLS_epidermis_FRET
# 5063
Dataset Kind Image data
Dataset Size 13.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1B_EKAREV-NLS_urothelium_FRET
# 5064
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1C_EKAREV-NES_epiermis_FRET
# 5065
Dataset Kind Image data
Dataset Size 24.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1D_EKAREV-NES_urothelium_FRET
# 5066
Dataset Kind Image data
Dataset Size 34.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1EF_20140402_urothelium_nuclear_displacement_tracking
# 5067
Dataset Kind Image data
Dataset Size 102.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1EF_20170217_epidermis_nuclear_displacement_tracking
# 5068
Dataset Kind Image data
Dataset Size 665.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1G_epidermis_20170208-1_nuclear_displacement_tracking
# 5069
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1G_epidermis_20170208-2_nuclear_displacement_tracking
# 5070
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1G_epidermis_20170217-8_epidermis_nuclear_displacement_tracking
# 5071
Dataset Kind Image data
Dataset Size 28.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1G_urothelium_20150219-3_nuclear_displacement_tracking
# 5072
Dataset Kind Image data
Dataset Size 51.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1G_urothelium_20160811_nuclear_displacement_tracking
# 5073
Dataset Kind Image data
Dataset Size 30.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1G_urothelium_20170315_nuclear_displacement_tracking
# 5074
Dataset Kind Image data
Dataset Size 30.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure1H_urothelial_motion_tracking
# 5075
Dataset Kind Image data
Dataset Size 56.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure2AC_epiehtlial_wound_cellmigration_track
# 5076
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure2DE_urothelium_wound_cellmigration_track
# 5077
Dataset Kind Image data
Dataset Size 77.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure3A_20150917_epidermis_MEKi
# 5078
Dataset Kind Image data
Dataset Size 24.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure3A_20150921_epidermis_MEKi
# 5079
Dataset Kind Image data
Dataset Size 49.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure3A_20151017_epidermis_MEKi
# 5080
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure3B_20161114_urothelium_MEKi
# 5081
Dataset Kind Image data
Dataset Size 54.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure3B_20161116_urothelium_MEKi
# 5082
Dataset Kind Image data
Dataset Size 45.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure3B_20161129_urothelium_MEKi
# 5083
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_epidermis_Fucci_20161221-1_1
# 5084
Dataset Kind Image data
Dataset Size 504.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_epidermis_Fucci_20161221-1_2
# 5085
Dataset Kind Image data
Dataset Size 615.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_epidermis_Fucci_20161221-2
# 5086
Dataset Kind Image data
Dataset Size 615.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_epidermis_Fucci_20161222
# 5087
Dataset Kind Image data
Dataset Size 504.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Figure4A_urothelium_Fucci_20161226
# 5088
Dataset Kind Image data
Dataset Size 847.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data