Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig1B_140414_PIAS1_localize
# 5761
Dataset Kind Image data
Dataset Size 13.3 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1C_141016_PIAS1_metaphaseI_4h
# 5762
Dataset Kind Image data
Dataset Size 419.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1C_141016_PIAS1_metaphaseI_8h
# 5763
Dataset Kind Image data
Dataset Size 395.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1C_141016_PIAS1_metaphaseI_9h
# 5764
Dataset Kind Image data
Dataset Size 290.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1C_141016_PIAS1_metaphaseI_10h
# 5765
Dataset Kind Image data
Dataset Size 222.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1C_141016_PIAS1_metaphaseII_12h
# 5766
Dataset Kind Image data
Dataset Size 204.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_arrestedMI
# 5767
Dataset Kind Image data
Dataset Size 437.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_MI_samples1
# 5768
Dataset Kind Image data
Dataset Size 407.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_MI_samples2
# 5769
Dataset Kind Image data
Dataset Size 434.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_MII_group1
# 5770
Dataset Kind Image data
Dataset Size 311.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_MII_samples1
# 5771
Dataset Kind Image data
Dataset Size 276.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_MII_samples2
# 5772
Dataset Kind Image data
Dataset Size 335.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_TelophaseI_samples1
# 5773
Dataset Kind Image data
Dataset Size 201.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_TelophaseI_samples2
# 5774
Dataset Kind Image data
Dataset Size 227.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_TelophaseI_samples3
# 5775
Dataset Kind Image data
Dataset Size 198.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1D_FigS1B_160420_TelophaseI_samples4
# 5776
Dataset Kind Image data
Dataset Size 278.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset fig1E_150327_NG-SUMO1gg
# 5777
Dataset Kind Image data
Dataset Size 3.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_S1D-E_150327_NG-SUMO2gg
# 5778
Dataset Kind Image data
Dataset Size 4.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_S1D-E_150327_NG-SUMO3gg
# 5779
Dataset Kind Image data
Dataset Size 3.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_171226_CENP-C
# 5780
Dataset Kind Image data
Dataset Size 4.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_171226_PIAS-CENP-C
# 5781
Dataset Kind Image data
Dataset Size 5.1 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_171226_PIASdn
# 5782
Dataset Kind Image data
Dataset Size 4.2 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_171226_PIASdn-CENP-C
# 5783
Dataset Kind Image data
Dataset Size 3.3 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_180105_CENP-C
# 5784
Dataset Kind Image data
Dataset Size 7.2 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_180105_PIAS-CENP-C
# 5785
Dataset Kind Image data
Dataset Size 6.3 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_180105_PIASdn
# 5786
Dataset Kind Image data
Dataset Size 5.4 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_180105_PIASdn-CENP-C
# 5787
Dataset Kind Image data
Dataset Size 6.3 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2A_180106_MII
# 5788
Datast ID Fig2A_180106_MII
Dataset Kind Image data
Dataset Size 437.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset fig2B_150317_cenpc_control
# 5789
Dataset Kind Image data
Dataset Size 501.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset fig2B_150317_pias1dn_cenpc
# 5790
Dataset Kind Image data
Dataset Size 579.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2C_150330_cenpc
# 5791
Datast ID Fig2C_150330_cenpc
Dataset Kind Image data
Dataset Size 656.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2C_150330_pias1_cenpc
# 5792
Dataset Kind Image data
Dataset Size 587.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_cenpc_image1
# 5793
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_cenpc_image2
# 5794
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_cenpc_image3
# 5795
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1_cenpc_1
# 5796
Dataset Kind Image data
Dataset Size 171.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1_cenpc_2
# 5797
Dataset Kind Image data
Dataset Size 299.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1_cenpc_3
# 5798
Dataset Kind Image data
Dataset Size 184.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image20
# 5799
Dataset Kind Image data
Dataset Size 26.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image21
# 5800
Dataset Kind Image data
Dataset Size 9.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image22
# 5801
Dataset Kind Image data
Dataset Size 29.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image23
# 5802
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image24
# 5803
Dataset Kind Image data
Dataset Size 35.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image25
# 5804
Dataset Kind Image data
Dataset Size 13.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image26
# 5805
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_150527_pias1dn_cenpc_image27
# 5806
Dataset Kind Image data
Dataset Size 43.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_control_cenpc_image1_1
# 5807
Dataset Kind Image data
Dataset Size 20.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_control_cenpc_image1_2
# 5808
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_control_cenpc_image2_1
# 5809
Dataset Kind Image data
Dataset Size 21.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_control_cenpc_image2_2
# 5810
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data