SSBD:database

258-Oginuma-EmbryoDev

OMERO gallery,
OMERO index

Project

Title
Time-lapse imaging of hba reporter expression in the GFP knock-in N. furzeri embryos.
Description
License
CC BY
Released at
May 11, 2023, midnight
Updated at
Funding
# of image datasets
1

Papers

Papers
Paper information: Masayuki Oginuma, Moana Nishida, Tomomi Ohmura-Adachi, Kota Abe, Shohei Ogamino, Chihiro Mogi, Hideaki Matsui, Tohru Ishitani (2022) Rapid reverse genetics systems for Nothobranchius furzeri, a suitable model organism to study vertebrate aging., Scientific reports, Volume 12, Number 1, pp. 11628,
Pubmed ID: 35804091,
PMCID: 9270483,
DOI: https://doi.org/10.1038/s41598-022-15972-3,

Contacts

Contacts
Tohru Ishitani (Contact) , Research Institute for Microbial Diseases , Osaka University

Biosamples

Organisms
Nothobranchius furzeri (NCBI:txid105023)
Strains
NA
Cells
Cell lines
NA

Anatomical information

UBERON
Anatomical entities

Gene ontology

GO: Biological processes
CRISPR-cas system (GO:0099048)
GO: Cellular components
GO: Molecular functions

Molecular biological information

Gene names
Protein names
Genetic methods
Protein tags
Probes
Oligo Primer
Genotype

Reagent or Compound

Reagent or Compound
Concentration
Fold Dilution

Imaging information

Dimensions
X scales
2.468 micrometer/pixel,
Y scales
2.468 micrometer/pixel,
Z scales
NA,
T scales
0.14 sceonds of time interval,
Channels
,

Biological Imaging Methods Ontology

Microscopy types
Detection methods
Visualization methods
Illumination methods
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Imaged parameters
Sample preparation methods

Instruments

Datasets

Dataset name
Organism
Gene / Protein
Dimensions
File size
SSBD:OMERO
Download
FigS1_GFP_knock-in_Nfurzeri_embryo
Nothobranchius furzeri (NCBI:txid105023)
52441977
Gallery, Index
zip