SSBD:database

220-Imanishi-ROCKActivity

OMERO gallery,
OMERO index

Project

Title
Time lapse images of the spatiotemporal regulation of ROCK activity in mice live blood vessels.
Description
License
CC BY
Released at
Feb. 16, 2023, midnight
Updated at
Funding
# of image datasets
134

Papers

Papers
Paper information: Ayako Imanishi, Hiroshi Ichise, Chuyun Fan, Yasuaki Nakagawa, Koichiro Kuwahara, Kenta Sumiyama, Michiyuki Matsuda, Kenta Terai (2021) Visualization of Spatially-Controlled Vasospasm by Sympathetic Nerve-Mediated ROCK Activation., The American journal of pathology, Volume 191, Number 1, pp. 194-203,
Pubmed ID: 33069718,
DOI: https://doi.org/10.1016/j.ajpath.2020.09.012,

Contacts

Contacts
Kenta Terai (Contact) , Graduate School of Medicine , kyoto University

Biosamples

Organisms
Mus musculus (NCBI:txid10090)
Strains
NA
Cells
Cell lines
NA

Anatomical information

UBERON
Anatomical entities

Gene ontology

GO: Biological processes
GO: Cellular components
GO: Molecular functions

Molecular biological information

Gene names
Protein names
Genetic methods
Protein tags
Probes
Oligo Primer
Genotype

Reagent or Compound

Reagent or Compound
Concentration
Fold Dilution

Imaging information

Dimensions
X scales
0.349 micrometer/pixel, 0.29 micrometer/pixel, 0.497 micrometer/pixel, 0.262 micrometer/pixel, 0.284 micrometer/pixel, 0.331 micrometer/pixel, 0.378 micrometer/pixel, 0.324 micrometer/pixel, 0.2842157 micrometer/pixel,
Y scales
0.349 micrometer/pixel, 0.29 micrometer/pixel, 0.497 micrometer/pixel, 0.262 micrometer/pixel, 0.284 micrometer/pixel, 0.331 micrometer/pixel, 0.378 micrometer/pixel, 0.324 micrometer/pixel, 0.2842157 micrometer/pixel,
Z scales
0.3461841 micrometer/slice, 1 micrometer/slice,
T scales
5.5 seconds per frame, 0.58 second per frame, 5.63 seconds per frame, 5.54 seconds per frame, 5.46 seconds per frame, NA, 5.36 seconds per frame, 2.83 second per frame, 6.15 seconds per frame, 7.22 seconds per frame, 5.57 seconds per frame, 6.73 seconds per frame, 6.64 seconds per frame, 0.65 second per frame, 0.63 second per frame, 0.6 second per frame, 0.71 second per frame, 0.85 second per frame, 5.33 seconds per frame, 5.03 seconds per frame, 3.34 second per frame, 5.51 seconds per frame, 5.6 seconds per frame, 5.08 seconds per frame, 5.49 seconds per frame, 0.64 second per frame, 0.57 second per frame, 0.56 second per frame, 0.7 second per frame,
Channels
,

Biological Imaging Methods Ontology

Microscopy types
Detection methods
Visualization methods
Illumination methods
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Imaged parameters
Sample preparation methods

Instruments

Datasets

Dataset name
Organism
Gene / Protein
Dimensions
File size
SSBD:OMERO
Download
Fig1A_181016_arterioles
Mus musculus (NCBI:txid10090)
684476614
Gallery, Index
zip
Fig1D_1a_70parcent
Mus musculus (NCBI:txid10090)
135728758
Gallery, Index
zip
Fig1D_5b_70parcent
Mus musculus (NCBI:txid10090)
135727796
Gallery, Index
zip
Fig1D_6b_70parcent
Mus musculus (NCBI:txid10090)
135727800
Gallery, Index
zip
Fig1D_7b_70parcent
Mus musculus (NCBI:txid10090)
135727800
Gallery, Index
zip
Fig1D_8b_70parcent
Mus musculus (NCBI:txid10090)
135727796
Gallery, Index
zip
Fig2B_6b_70parcent
Mus musculus (NCBI:txid10090)
11313386
Gallery, Index
zip
Fig2C_180724_ERK
Mus musculus (NCBI:txid10090)
363551932
Gallery, Index
zip
Fig2C_181122_PKA
Mus musculus (NCBI:txid10090)
203450814
Gallery, Index
zip
Fig2D_Fas_13d_80parcent
Mus musculus (NCBI:txid10090)
11313798
Gallery, Index
zip
Fig2E_control_190209_1a
Mus musculus (NCBI:txid10090)
139474682
Gallery, Index
zip
Fig2E_control_191128_1a
Mus musculus (NCBI:txid10090)
34341676
Gallery, Index
zip
Fig2E_control_191128_6c
Mus musculus (NCBI:txid10090)
34340562
Gallery, Index
zip
Fig2E_control_191212_4a
Mus musculus (NCBI:txid10090)
11300514
Gallery, Index
zip
Fig2E_control_191212_5b
Mus musculus (NCBI:txid10090)
11313390
Gallery, Index
zip
Fig2E_control_191212_6b
Mus musculus (NCBI:txid10090)
11313386
Gallery, Index
zip
Fig2E_control_191220_2a_re
Mus musculus (NCBI:txid10090)
11313550
Gallery, Index
zip
Fig2E_control_191220_6c
Mus musculus (NCBI:txid10090)
11313396
Gallery, Index
zip
Fig2E_control_191229_1a_re
Mus musculus (NCBI:txid10090)
11313694
Gallery, Index
zip
Fig2E_control_191229_3c
Mus musculus (NCBI:txid10090)
11313374
Gallery, Index
zip
Fig2E_control_200115_3b
Mus musculus (NCBI:txid10090)
11312970
Gallery, Index
zip
Fig2E_control_200115_4b
Mus musculus (NCBI:txid10090)
11312968
Gallery, Index
zip
Fig2E_ERK_200625_03
Mus musculus (NCBI:txid10090)
21355156
Gallery, Index
zip
Fig2E_ERK_200625_06
Mus musculus (NCBI:txid10090)
21355156
Gallery, Index
zip
Fig2E_ERK_200625_07
Mus musculus (NCBI:txid10090)
21355086
Gallery, Index
zip
Fig2E_ERK_200626_017
Mus musculus (NCBI:txid10090)
21355161
Gallery, Index
zip
Fig2E_ERK_200626_023
Mus musculus (NCBI:txid10090)
21929343
Gallery, Index
zip
Fig2E_Fasudil_180718
Mus musculus (NCBI:txid10090)
452419300
Gallery, Index
zip
Fig2E_Fasudil_191212_Fas_7b
Mus musculus (NCBI:txid10090)
11313610
Gallery, Index
zip
Fig2E_Fasudil_191212_Fas_8b
Mus musculus (NCBI:txid10090)
11313610
Gallery, Index
zip
Fig2E_Fasudil_191212_Fas_10c
Mus musculus (NCBI:txid10090)
11046872
Gallery, Index
zip
Fig2E_Fasudil_191212_Fas_11c
Mus musculus (NCBI:txid10090)
11313972
Gallery, Index
zip
Fig2E_Fasudil_191212_Fas_13d
Mus musculus (NCBI:txid10090)
11313798
Gallery, Index
zip
Fig2E_Fasudil_191220_Fas_8c
Mus musculus (NCBI:txid10090)
11046696
Gallery, Index
zip
Fig2E_Fasudil_191220_Fas_10d
Mus musculus (NCBI:txid10090)
11046898
Gallery, Index
zip
Fig2E_PKA_200522_003
Mus musculus (NCBI:txid10090)
24865852
Gallery, Index
zip
Fig2E_PKA_200522_012
Mus musculus (NCBI:txid10090)
21355301
Gallery, Index
zip
Fig2E_PKA_200626_004
Mus musculus (NCBI:txid10090)
21929417
Gallery, Index
zip
Fig2E_PKA_200626_007
Mus musculus (NCBI:txid10090)
21929417
Gallery, Index
zip
Fig2E_PKA_200626_008
Mus musculus (NCBI:txid10090)
21929417
Gallery, Index
zip
Fig2E_PKA_200706_04
Mus musculus (NCBI:txid10090)
21355176
Gallery, Index
zip
Fig2E_PKA_200706_07
Mus musculus (NCBI:txid10090)
21355178
Gallery, Index
zip
Fig2E_PKA_200707_02
Mus musculus (NCBI:txid10090)
21355176
Gallery, Index
zip
Fig2E_PKA_200707_04
Mus musculus (NCBI:txid10090)
21355176
Gallery, Index
zip
Fig3A_180912_control
Mus musculus (NCBI:txid10090)
363545600
Gallery, Index
zip
Fig3A_180912_Fas
Mus musculus (NCBI:txid10090)
452418322
Gallery, Index
zip
Fig3B_control_180612
Mus musculus (NCBI:txid10090)
241892414
Gallery, Index
zip
Fig3B_control_180627
Mus musculus (NCBI:txid10090)
242418618
Gallery, Index
zip
Fig3B_control_180714
Mus musculus (NCBI:txid10090)
363543094
Gallery, Index
zip
Fig3B_control_180718
Mus musculus (NCBI:txid10090)
363551960
Gallery, Index
zip
Fig3B_control_180821
Mus musculus (NCBI:txid10090)
452420754
Gallery, Index
zip
Fig3B_control_180824
Mus musculus (NCBI:txid10090)
727064634
Gallery, Index
zip
Fig3B_control_180912
Mus musculus (NCBI:txid10090)
363545590
Gallery, Index
zip
Fig3B_control_180918
Mus musculus (NCBI:txid10090)
1090629568
Gallery, Index
zip
Fig3B_control_181001
Mus musculus (NCBI:txid10090)
242416162
Gallery, Index
zip
Fig3B_control_181004
Mus musculus (NCBI:txid10090)
241891728
Gallery, Index
zip
Fig3B_control_181005
Mus musculus (NCBI:txid10090)
242416160
Gallery, Index
zip
Fig3B_control_181006
Mus musculus (NCBI:txid10090)
242420778
Gallery, Index
zip
Fig3B_control_181029_1a
Mus musculus (NCBI:txid10090)
363541734
Gallery, Index
zip
Fig3B_control_181029_2b
Mus musculus (NCBI:txid10090)
363529856
Gallery, Index
zip
Fig3B_control_190202_1a
Mus musculus (NCBI:txid10090)
188543040
Gallery, Index
zip
Fig3B_control_190202_4b
Mus musculus (NCBI:txid10090)
241898182
Gallery, Index
zip
Fig3B_control_190204_1a
Mus musculus (NCBI:txid10090)
242432650
Gallery, Index
zip
Fig3B_control_190204_2b
Mus musculus (NCBI:txid10090)
242426184
Gallery, Index
zip
Fig3B_control_190209_1a
Mus musculus (NCBI:txid10090)
139473096
Gallery, Index
zip
Fig3B_control_190209_3b
Mus musculus (NCBI:txid10090)
82898330
Gallery, Index
zip
Fig3B_control_190429_1a
Mus musculus (NCBI:txid10090)
135718788
Gallery, Index
zip
Fig3B_control_190429_2a
Mus musculus (NCBI:txid10090)
135710312
Gallery, Index
zip
Fig3B_Fasudil_180528
Mus musculus (NCBI:txid10090)
242428792
Gallery, Index
zip
Fig3B_Fasudil_180612_5
Mus musculus (NCBI:txid10090)
242425284
Gallery, Index
zip
Fig3B_Fasudil_180612_8
Mus musculus (NCBI:txid10090)
241901680
Gallery, Index
zip
Fig3B_Fasudil_180612_9
Mus musculus (NCBI:txid10090)
241901680
Gallery, Index
zip
Fig3B_Fasudil_180627_4
Mus musculus (NCBI:txid10090)
242422392
Gallery, Index
zip
Fig3B_Fasudil_180627_6
Mus musculus (NCBI:txid10090)
242422444
Gallery, Index
zip
Fig3B_Fasudil_180714_d11
Mus musculus (NCBI:txid10090)
363540480
Gallery, Index
zip
Fig3B_Fasudil_180714_e13
Mus musculus (NCBI:txid10090)
363534018
Gallery, Index
zip
Fig3B_Fasudil_180718_c6
Mus musculus (NCBI:txid10090)
452420974
Gallery, Index
zip
Fig3B_Fasudil_180718_c7
Mus musculus (NCBI:txid10090)
452420968
Gallery, Index
zip
Fig3B_Fasudil_180718_c8
Mus musculus (NCBI:txid10090)
67597832
Gallery, Index
zip
Fig3B_Fasudil_180718_c9
Mus musculus (NCBI:txid10090)
452418322
Gallery, Index
zip
Fig3B_Fasudil_180718_c10
Mus musculus (NCBI:txid10090)
451426080
Gallery, Index
zip
Fig4A_200115_10c
Mus musculus (NCBI:txid10090)
11046908
Gallery, Index
zip
Fig4B_200205_10e
Mus musculus (NCBI:txid10090)
11314294
Gallery, Index
zip
Fig4C_Duration_Atropine_200205_3a
Mus musculus (NCBI:txid10090)
168765332
Gallery, Index
zip
Fig4C_Duration_Atropine_200302_2a
Mus musculus (NCBI:txid10090)
135510880
Gallery, Index
zip
Fig4C_Duration_Atropine_200302_3c
Mus musculus (NCBI:txid10090)
135510876
Gallery, Index
zip
Fig4C_Duration_Atropine_200302_4c
Mus musculus (NCBI:txid10090)
135510876
Gallery, Index
zip
Fig4C_Duration_Atropine_200302_7e
Mus musculus (NCBI:txid10090)
135509834
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_190118_3c
Mus musculus (NCBI:txid10090)
27840436
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_190118_7f
Mus musculus (NCBI:txid10090)
189063950
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_200302_3b
Mus musculus (NCBI:txid10090)
135507576
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_200302_4b
Mus musculus (NCBI:txid10090)
135505960
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_200302_5b
Mus musculus (NCBI:txid10090)
135508384
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_200302_6b
Mus musculus (NCBI:txid10090)
134848210
Gallery, Index
zip
Fig4C_Duration_Hexamethonium_200302_7c
Mus musculus (NCBI:txid10090)
135508372
Gallery, Index
zip
Fig4C_Duration_PBS_200604
Mus musculus (NCBI:txid10090)
22503601
Gallery, Index
zip
Fig4C_Duration_PBS_200616_05
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_Duration_PBS_200616_08
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_Duration_PBS_200617
Mus musculus (NCBI:txid10090)
21355251
Gallery, Index
zip
Fig4C_Duration_PBS_200707_01
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_Duration_PBS_200707_02
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_Duration_PBS_200707_03
Mus musculus (NCBI:txid10090)
21355111
Gallery, Index
zip
Fig4C_Duration_TTX_02
Mus musculus (NCBI:txid10090)
276438447
Gallery, Index
zip
Fig4C_Duration_TTX_03
Mus musculus (NCBI:txid10090)
276438447
Gallery, Index
zip
Fig4C_Duration_TTX_06
Mus musculus (NCBI:txid10090)
277917823
Gallery, Index
zip
Fig4C_Duration_TTX_07
Mus musculus (NCBI:txid10090)
276438447
Gallery, Index
zip
Fig4C_ROCK_Atropine_200205_7c
Mus musculus (NCBI:txid10090)
11314218
Gallery, Index
zip
Fig4C_ROCK_Atropine_200205_9e
Mus musculus (NCBI:txid10090)
11314242
Gallery, Index
zip
Fig4C_ROCK_Atropine_200205_10e
Mus musculus (NCBI:txid10090)
11314294
Gallery, Index
zip
Fig4C_ROCK_Atropine_200205_11f
Mus musculus (NCBI:txid10090)
11314138
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200115_5c
Mus musculus (NCBI:txid10090)
11313770
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200115_6c
Mus musculus (NCBI:txid10090)
11313770
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200115_7c
Mus musculus (NCBI:txid10090)
11313766
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200115_8c
Mus musculus (NCBI:txid10090)
11313764
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200115_10c
Mus musculus (NCBI:txid10090)
11046908
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200129_4c
Mus musculus (NCBI:txid10090)
11046828
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200129_7f
Mus musculus (NCBI:txid10090)
11313410
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200129_8f
Mus musculus (NCBI:txid10090)
11313404
Gallery, Index
zip
Fig4C_ROCK_Hexamethonium_200129_10f
Mus musculus (NCBI:txid10090)
8877204
Gallery, Index
zip
Fig4C_ROCK_PBS_200604
Mus musculus (NCBI:txid10090)
22503601
Gallery, Index
zip
Fig4C_ROCK_PBS_200616_05
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_ROCK_PBS_200616_08
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_ROCK_PBS_200617
Mus musculus (NCBI:txid10090)
21355251
Gallery, Index
zip
Fig4C_ROCK_PBS_200707_01
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_ROCK_PBS_200707_02
Mus musculus (NCBI:txid10090)
21355181
Gallery, Index
zip
Fig4C_ROCK_PBS_200707_03
Mus musculus (NCBI:txid10090)
21355111
Gallery, Index
zip
SuppFigS1A_figure1A_vasospasm
Mus musculus (NCBI:txid10090)
27852822
Gallery, Index
zip
SuppFigS1B_intetine
Mus musculus (NCBI:txid10090)
84710023
Gallery, Index
zip
SuppFigS1C_auricular_epidermis
Mus musculus (NCBI:txid10090)
8473469
Gallery, Index
zip
SuppFigS1C_kidney
Mus musculus (NCBI:txid10090)
10588991
Gallery, Index
zip
SuppFigS1C_liver
Mus musculus (NCBI:txid10090)
10591509
Gallery, Index
zip
SuppFigS1C_lymphnode
Mus musculus (NCBI:txid10090)
46602857
Gallery, Index
zip
SuppFigS1C_pancreas
Mus musculus (NCBI:txid10090)
10590171
Gallery, Index
zip
SuppFigS1C_spleen
Mus musculus (NCBI:txid10090)
10591851
Gallery, Index
zip