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166-Takubo-ECsTrajectory
Author reviewed
Time-lapse images and BDML file for quantiative information about tracking of Vascular endothelial cells (ECs) nuclei in branches.
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project ID
166-Takubo-ECsTrajectory
Title
Time-lapse images and BDML file for quantiative information about tracking of Vascular endothelial cells (ECs) nuclei in branches.
Description
-
Release Date
2021-09-30
Update Date
-
License
CC BY
Version
1.0.0
Method Summary
See details in Takubo N, et. al. (2019) Sci Rep, 9(1):9304.
Paper DOI
https://doi.org/10.1038/s41598-019-45666-2
Paper URL
https://www.ncbi.nlm.nih.gov/pubmed/31243314
Kind
Image data
Quantitative data
Total
2035 files / 7.5 GB
Image datasets
zipped 5 files / 2.3 GB, raw image 2018 files / 5.2 GB, total 2023 files / 7.5 GB
Quantitative datasets
zipped 4 files / 257.3 KB, raw bdml 8 files / 5.4 MB, total 12 files / 5.6 MB
Organism
Mus musculus
(
NCBITaxon:10090
)
Strain
-
Cell line
endothelial cell ( CL:0000115 )
Biological Process
endothelial cell morphogenesis (
GO:0001886
)
Cellular Component
nucleus (
GO:0005634
)
Medical Subject Headings
Animals (
MeSH:D000818
)
Anisotropy (
MeSH:D016880
)
Aorta (
MeSH:D001011
)
Aorta/pathology (
MeSH:Q000473
)
Cell Movement (
MeSH:D002465
)
Endothelial Cells (
MeSH:D042783
)
Endothelial Cells/cytology (
MeSH:Q000166
)
Humans (
MeSH:D006801
)
Mice (
MeSH:D051379
)
Mice
Inbred C57BL (
MeSH:D008810
)
Models
Theoretical (
MeSH:D008962
)
Morphogenesis (
MeSH:D009024
)
Neovascularization
Physiologic (
MeSH:D018919
)
Vascular Endothelial Growth Factor A (
MeSH:D042461
)
Vascular Endothelial Growth Factor A/metabolism (
MeSH:Q000378
)
Method involved in biological imaging
time lapse microscopy (
FBbi:00000249
)
Image datasets
5
Quantitative datasets
4
Paper DOI / Paper URL
PMID: 31243314
,
doi: 10.1038/s41598-019-45666-2
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/659/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-659
downloads
https://ssbd.riken.jp/data/166-Takubo-ECsTrajectory/
People
Contact
Naoko Takubo
The University of Tokyo
Present address: Isotope Science Center
-
Hiroki Kurihara
The University of Tokyo
Department of Molecular Cell Biology, Graduate School of Medicine
-
Imaging dataset contributor
-
Quantitative dataset contributor
Naoko Takubo (The University of Tokyo)
Hiroki Kurihara (The University of Tokyo)
Ryo Yoshida (Research Organization of Information and Systems)
Terumasa Tokunaga (Kyushu Institute of Technology)
Datasets
Thumbnail
Dataset
Organism
Kind / Links
Fig1b_movie1_ECNuclei_trajectory
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse images of tracking of individual EC nuclei in an elongating branch.
Fig1b_movie1_ECNuclei_trajectory
Mus musculus
(
NCBITaxon:10090
)
Quantitative data
BDML
BDML file for quantiative information about tracking of individual EC nuclei in an elongating branch.
Fig2c_ECs_U-turn
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse images of observation of ECs including a U-turn cell in elongating branch.
Fig3a_ECNuclei_trajectory_branch1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse images of cell nuclei movement in elongation of branches #1.
Fig3a_ECNuclei_trajectory_branch1
Mus musculus
(
NCBITaxon:10090
)
Quantitative data
BDML
BDML file for quantiative information about cell nuclei movement in elongation of branches #1.
Fig3b_ECNuclei_trajectory_branch2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse images of cell nuclei movement in elongation of branches #2.
Fig3b_ECNuclei_trajectory_branch2
Mus musculus
(
NCBITaxon:10090
)
Quantitative data
BDML
BDML file for quantiative information about cell nuclei movement in elongation of branches #2.
Fig4c_ECNuclei_trajectory_isolated_branch
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse images of tracking of individual EC nuclei of isolated branch.
Fig4c_ECNuclei_trajectory_isolated_branch
Mus musculus
(
NCBITaxon:10090
)
Quantitative data
BDML
BDML file for quantiative information about tracking of individual EC nuclei of isolated branch.