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SSBD:OMERO
SSBD:BFF
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89-Isshiki-SpineDyn
Author reviewed
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project name
89-Isshiki-SpineDyn
Release date
2018-11-14
Update date
-
Pre-release URL
-
Project title
Time-lapse images of spine dynamics in patDp/+ or NLG R451C and wild-type mice
License
CC BY
Method summary
See details in Isshiki et al. (2014) Nat Commun, 5: 4742.
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/25144834
Kind
Image data
Organism
Mus musculus
(
NCBITaxon:10090
)
Total
81 files / 3.8 GB
Image datasets
zipped 41 files / 1.3 GB, raw image 40 files / 2.5 GB, total 81 files / 3.8 GB
Quantitative datasets
zipped 0 files / 0 bytes, raw bdml 0 files / 0 bytes, total 0 files / 0 bytes
Image datasets
40
Quantitative datasets
0
Strain
-
Datatype
spine dynamics
Basedon
Experiment
XYZ-scale
XY: 0.1534 micrometer/pixel, Z: 0.75 micrometer/slice
T-scale
2 day for each time interval
1 day for each time interval
dblink
None
External links
None
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV-300
Detector model
-
Objective model
XLPlan N, numerical aperture 1.05, Olympus
Filter set
-
Biological Process
-
Cellular Component
spine synapse (
GO:0106033
) , postsynaptic density (
GO:0014069
)
People
Contact
Shigeo Okabe
University of Tokyo
Department of Cellular Neurobiology, Graduate School of Medicine
-
Contributors
Masaaki Isshiki, Shinji Tanaka, Toshihiko Kuriu, Katsuhiko Tabuchi, Toru Takumi, Shigeo Okabe
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/201/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-201
downloads
https://ssbd.riken.jp/data/89-Isshiki-SpineDyn/
Dataset List
Thumbnail
Dataset
Organism
Kind / Links
Supfig7a_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of lost spines located near a shaft gephyrin cluster in wild-type mice at day 0.
Supfig7a_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of lost spines located near a shaft gephyrin cluster in wild-type mice at day 2.
Supfig7b_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of lost spines located away from a s shaft gephyrin cluster in patDp/+ mice at day 0.
Supfig7b_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of lost spines located away from a s shaft gephyrin cluster in patDp/+ mice at day 2.
fig1a_8wk
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of PSD-95 clusters in the SSC at 8 week of potnatal development.
fig1a_P14
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of PSD-95 clusters in the SSC at 14days of potnatal development.
fig1a_P21
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of PSD-95 clusters in the SSC at 21days of potnatal development.
fig1a_P7
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of PSD-95 clusters in the SSC at 7days of potnatal development.
fig1e_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 at 14days of potnatal development.
fig1e_day1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 at 15days of potnatal development.
fig2f_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 at day 0.
fig2f_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 over 2 days.
fig3a_pat_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of patDp/+ mice at day 0.
fig3a_pat_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of patDp/+ mice over 2 days.
fig3a_wt_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice at day 0.
fig3a_wt_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice over 2 days.
fig3e_pat_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of patDp/+ mice at day 0.
fig3e_pat_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of patDp/+ mice over 2 days.
fig3e_wt_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice at day 0.
fig3e_wt_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice over 2 days.
fig4a_pat_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of patDp/+ mice at day 0.
fig4a_pat_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of patDp/+ mice over 2 days.
fig4a_wt_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of wild-type mice at day 0.
fig4a_wt_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendries filled with DsRed2 in the AFC of wild-type mice over 2 days.
fig4e_pat_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of patDp/+ mice at postnatal week 2.
fig4e_pat_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of patDp/+ mice after 1 day of postnatal week 2.
fig4e_wt_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice at postnatal week 2.
fig4e_wt_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice after 1 day of postnatal week 2.
fig5a_R415C_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of NLGR51C mice at day 0.
fig5a_R415C_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of NLGR51C mice over 2 days.
fig5a_wt_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of wild-type mice at day 0.
fig5a_wt_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of PSD-95-GFP and dendrites filled with DsRed2 in the AFC of wild-type mice over 2 days.
fig5e_R451C_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of NLGR451C mice at day 0.
fig5e_R451C_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of NLGR451C mice over 2 days.
fig5e_wt_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice at day 0.
fig5e_wt_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
In vivo time-lapse image of gephyrin-GFP and dendrites filled with DsRed2 in the SSC of wild-type mice over 2 days.
fig6a_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of gephyrin-GFP clusters on the dendritic shaft at day 0.
fig6a_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of gephyrin-GFP clusters on the dendritic shaft over 2 days.
fig6b_day0
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of gephyrin-GFP clusters on the dendritic spines at day 0.
fig6b_day2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse image of gephyrin-GFP clusters on the dendritic spines over 2 days.